Filter by identifiers:
Displaying metabolites 3426 - 3450 of 3755 in total
Metabolite ID Name
CAS Number
IUPAC NameSMPDB PathwaysWeight
Formula
Structure
ECMDB01366Purine

120-73-0
7H-purine
Pyrimidine metabolism PW000942
120.1121

C5H4N4
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ECMDB01362Hydrogen (gas)

1333-74-0
dihydrogen
2,3-dihydroxybenzoate biosynthesis PW000751
Menaquinol biosythesis PW001897
2.0159

H2
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ECMDB013545,10-Methylene-THF

31690-11-6
(2S)-2-({4-[(6aR)-3-amino-1-oxo-1H,2H,5H,6H,6aH,7H,8H,9H-imidazolidino[1,5-f]pteridin-8-yl]phenyl}formamido)pentanedioic acid
Nitrogen metabolism PW000755
Pyrimidine metabolism PW000942
Pantothenate and CoA biosynthesis PW000828
One carbon pool by folate PW000773
GLYCINE BIOSYNTHESIS PW000808
One Carbon Pool by Folate I PW001735
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457.4399

C20H23N7O6
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ECMDB013532-Keto-3-deoxy-D-gluconic acid

17510-99-5
(4S,5R)-4,5,6-trihydroxy-2-oxohexanoic acid
hexuronide and hexuronate degradation PW000834
inner membrane transport PW000786
178.14

C6H10O6
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ECMDB01352Hydroxypyruvic acid

1113-60-6
3-hydroxy-2-oxopropanoic acid
104.0615

C3H4O4
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ECMDB01351Deoxyribose 1-phosphate

17210-42-3
{[(4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acid
Pyrimidine metabolism PW000942
purine deoxyribonucleosides degradation PW002077
pyrimidine deoxyribonucleosides degradation PW002063
salvage pathways of pyrimidine deoxyribonucleotides PW002061
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214.1104

C5H11O7P
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ECMDB01349Selenium

7782-49-2
selandiide
Selenium metabolism PW001894
78.96

Se
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ECMDB01347Isopentenyl pyrophosphate

358-71-4
({hydroxy[(3-methylbut-3-en-1-yl)oxy]phosphoryl}oxy)phosphonic acid
Secondary Metabolites: Ubiquinol biosynthesis PW000981
Secondary metabolites: isoprenoid biosynthesis (nonmevalonate pathway) PW000975
Secondary metabolites: methylerythritol phosphate and polyisoprenoid biosynthesis PW000958
Secondary Metabolites: Ubiquinol biosynthesis 2 PW002036
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246.0921

C5H12O7P2
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ECMDB01346GDP-4-Dehydro-6-deoxy-D-mannose

18186-48-6
[({[(2R,3S,4R,5R)-5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4R,6R)-3,4-dihydroxy-6-methyl-5-oxooxan-2-yl]oxy})phosphinic acid
Mannose Metabolism PW000822
colanic acid building blocks biosynthesis PW000951
587.3258

C16H23N5O15P2
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ECMDB01342Thymidine 5'-triphosphate

365-08-2
{[hydroxy({[hydroxy({[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl]methoxy})phosphoryl]oxy})phosphoryl]oxy}phosphonic acid
Pyrimidine metabolism PW000942
Starch and sucrose metabolism PW000941
Secondary Metabolites: enterobacterial common antigen biosynthesis PW000959
purine nucleotides de novo biosynthesis PW000910
purine nucleotides de novo biosynthesis 1435709748 PW000960
Secondary Metabolites: enterobacterial common antigen biosynthesis 2 PW002045
Secondary Metabolites: enterobacterial common antigen biosynthesis 3 PW002046
purine nucleotides de novo biosynthesis 2 PW002033
O-antigen building blocks biosynthesis PW002089
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482.1683

C10H17N2O14P3
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ECMDB01341ADP

58-64-0
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid
Glutathione metabolism PW000833
Oxidative phosphorylation PW000919
Nitrogen metabolism PW000755
Pyrimidine metabolism PW000942
Starch and sucrose metabolism PW000941
Galactose metabolism PW000821
Lysine biosynthesis PW000771
Folate biosynthesis PW000908
Pantothenate and CoA biosynthesis PW000828
Sulfur metabolism PW000922
Lipopolysaccharide biosynthesis PW000831
Biotin metabolism PW000762
D-Alanine metabolism PW000768
One carbon pool by folate PW000773
beta-Alanine metabolism PW000896
Propanoate metabolism PW000940
Fatty acid biosynthesis PW000900
D-Glutamine and D-glutamate metabolism PW000769
Biosynthesis of siderophore group nonribosomal peptides PW000760
Amino sugar and nucleotide sugar metabolism I PW000886
Amino sugar and nucleotide sugar metabolism II PW000887
Amino sugar and nucleotide sugar metabolism III PW000895
Ascorbate metabolism PW000793
Chorismate biosynthesis PW000816
Collection of Reactions without pathways PW001891
D-allulose degradation PW000825
Galactitol and galactonate degradation PW000820
Gluconeogenesis from L-malic acid PW000819
L-alanine metabolism PW000788
L-glutamate metabolism PW000789
L-glutamate metabolism II PW001886
NAD salvage PW000830
PRPP Biosynthesis PW000909
Porphyrin metabolism PW000936
Purine degradation PW001887
Quorum Sensing PW000836
S-adenosyl-L-methionine biosynthesis PW000837
Secondary Metabolites: threonine biosynthesis from aspartate PW000976
Secondary metabolites: Trehalose Biosynthesis and Metabolism PW000968
Secondary metabolites: isoprenoid biosynthesis (nonmevalonate pathway) PW000975
Secondary metabolites: methylerythritol phosphate and polyisoprenoid biosynthesis PW000958
TCA cycle PW000779
TCA cycle (ubiquinol-10) PW001010
TCA cycle (ubiquinol-2) PW001002
TCA cycle (ubiquinol-3) PW001003
TCA cycle (ubiquinol-4) PW001004
TCA cycle (ubiquinol-5) PW001005
TCA cycle (ubiquinol-6) PW001006
TCA cycle (ubiquinol-7) PW001007
TCA cycle (ubiquinol-8) PW001008
TCA cycle (ubiquinol-9) PW001009
Taurine Metabolism PW000774
Taurine Metabolism I PW001028
Vitamin B1/Thiamine PW000892
Vitamin B6 1430936196 PW000891
adenosylcobalamin salvage from cobinamide PW001884
arginine metabolism PW000790
cysteine biosynthesis PW000800
fatty acid elongation -- saturated PW000798
fructose metabolism PW000913
fucose and rhamnose degradation PW000826
galactose degradation/Leloir Pathway PW000884
glycerol metabolism PW000914
glycerol metabolism II PW000915
glycerol metabolism III (sn-glycero-3-phosphoethanolamine) PW000916
glycerol metabolism IV (glycerophosphoglycerol) PW000917
glycerol metabolism V (glycerophosphoserine) PW000918
glycolate and glyoxylate degradation PW000827
glycolysis and pyruvate dehydrogenase PW000785
hexuronide and hexuronate degradation PW000834
inner membrane transport PW000786
isoleucine biosynthesis PW000818
ornithine metabolism PW000791
palmitate biosynthesis PW000797
peptidoglycan biosynthesis I PW000906
preQ0 metabolism PW001893
proline metabolism PW000794
purine nucleotides de novo biosynthesis PW000910
purine nucleotides de novo biosynthesis 1435709748 PW000960
serine biosynthesis and metabolism PW000809
sulfur metabolism (butanesulfonate) PW000923
sulfur metabolism (ethanesulfonate) PW000925
sulfur metabolism (isethionate) PW000926
sulfur metabolism (methanesulfonate) PW000927
sulfur metabolism (propanesulfonate) PW000924
superpathway of D-glucarate and D-galactarate degradation PW000795
tRNA Charging 2 PW000803
tRNA charging PW000799
threonine biosynthesis PW000817
glutathione metabolism II PW001927
lipopolysaccharide biosynthesis II PW001905
Flavin biosynthesis PW001971
ketogluconate metabolism PW002003
glutathione metabolism III PW002018
TCA cycle (ubiquinol-0) PW002023
glycolate and glyoxylate degradation II PW002021
Thiamin diphosphate biosynthesis PW002028
1,6-anhydro-N-acetylmuramic acid recycling PW002064
Fructoselysine and Psicoselysine Degradation PW002049
Hydrogen Sulfide Biosynthesis I PW002066
N-acetylneuraminate and N-acetylmannosamine and N-acetylglucosamine degradation PW002030
Putrescine Degradation II PW002054
Spermidine Biosynthesis I PW002040
Thiosulfate Disproportionation III PW002060
adenine and adenosine salvage II PW002071
allantoin degradation (anaerobic) PW002050
biotin-carboxyl carrier protein assembly PW002067
guanine and guanosine salvage PW002074
lipopolysaccharide biosynthesis III PW002059
palmitate biosynthesis 2 PW002044
peptidoglycan biosynthesis I 2 PW002062
propanoyl CoA degradation PW002057
purine nucleotides de novo biosynthesis 2 PW002033
salvage pathways of pyrimidine deoxyribonucleotides PW002061
2-O-alpha-mannosyl-D-glycerate degradation PW002096
ADP-L-glycero-Beta-D-manno-heptose biosynthesis PW002095
Acetate metabolism PW002090
BaeSR Two-Component Signal Transduction System PW002111
L-arabinose Degradation I PW002103
L-lyxose Degradation PW002100
NAD phosphorylation and dephosphorylation PW002081
Ribose Degradation PW002102
Sedoheptulose Bisphosphate Bypass PW002098
Trehalose Degradation I (low osmolarity) PW002097
Xylose Degradation I PW002105
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427.2011

C10H15N5O10P2
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ECMDB01339Glutaryl-CoA

103192-48-9
5-{[2-(3-{3-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-2-hydroxy-3-methylbutanamido}propanamido)ethyl]sulfanyl}-5-oxopentanoic acid
Tryptophan metabolism PW000815
Fatty acid metabolism PW000796
881.633

C26H42N7O19P3S
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ECMDB01338Palmityl-CoA

1763-10-6
{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-2-[({[({3-[(2-{[2-(hexadecanoylsulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxy}phosphonic acid
Fatty acid metabolism PW000796
fatty acid oxidation (myristate) PW001021
fatty acid oxidation (palmitate) PW001023
1005.943

C37H66N7O17P3S
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ECMDB01333Manganese

7439-96-5
manganese(2+) ion
Porphyrin metabolism PW000936
Secondary Metabolites: Ubiquinol biosynthesis PW000981
Secondary metabolites: isoprenoid biosynthesis (nonmevalonate pathway) PW000975
Secondary metabolites: methylerythritol phosphate and polyisoprenoid biosynthesis PW000958
peptidoglycan biosynthesis I PW000906
Secondary Metabolites: Ubiquinol biosynthesis 2 PW002036
peptidoglycan biosynthesis I 2 PW002062
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54.938

Mn
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ECMDB01332Adenylsuccinic acid

19046-78-7
(2S)-2-({9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-[(phosphonooxy)methyl]oxolan-2-yl]-9H-purin-6-yl}amino)butanedioic acid
purine nucleotides de novo biosynthesis PW000910
purine nucleotides de novo biosynthesis 1435709748 PW000960
purine nucleotides de novo biosynthesis 2 PW002033
463.2934

C14H18N5O11P
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ECMDB01328dTDP-D-Glucose

2196-62-5
{[hydroxy({[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphoryl]oxy}({[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl]methoxy})phosphinic acid
Starch and sucrose metabolism PW000941
Secondary Metabolites: enterobacterial common antigen biosynthesis PW000959
Secondary Metabolites: enterobacterial common antigen biosynthesis 2 PW002045
O-antigen building blocks biosynthesis PW002089
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564.329

C16H26N2O16P2
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ECMDB01319Pyridoxine 5'-phosphate

447-05-2
{[5-hydroxy-4-(hydroxymethyl)-6-methylpyridin-3-yl]methoxy}phosphonic acid
Vitamin B6 1430936196 PW000891
249.1577

C8H12NO6P
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ECMDB01317N5-Carboxyaminoimidazole ribonucleotide

5-amino-1-{3,4-dihydroxy-5-[(phosphonooxy)methyl]oxolan-2-yl}-1H-imidazole-4-carboxylate
purine nucleotides de novo biosynthesis PW000910
purine nucleotides de novo biosynthesis 1435709748 PW000960
339.1959

C9H14N3O9P
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ECMDB013166-Phosphogluconic acid

921-62-0
(2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-(phosphonooxy)hexanoic acid
Glutathione metabolism PW000833
Pentose Phosphate PW000893
276.1352

C6H13O10P
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ECMDB01313D-Myo-inositol 4-phosphate

46495-39-0
{[(2R,3S,5S,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphonic acid
260.1358

C6H13O9P
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ECMDB01311D-Lactic acid

10326-41-7
(2S)-2-hydroxypropanoic acid
Amino sugar and nucleotide sugar metabolism I PW000886
Amino sugar and nucleotide sugar metabolism II PW000887
Amino sugar and nucleotide sugar metabolism III PW000895
1,6-anhydro-N-acetylmuramic acid recycling PW002064
methylglyoxal degradation II PW002084
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90.0779

C3H6O3
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ECMDB01310D-Alanine

338-69-2
(2R)-2-aminopropanoic acid
D-Alanine metabolism PW000768
L-alanine metabolism PW000788
inner membrane transport PW000786
peptidoglycan biosynthesis I PW000906
peptidoglycan biosynthesis I 2 PW002062
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89.0932

C3H7NO2
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ECMDB013085'-Phosphoribosyl-N-formylglycineamide

{[(2R,3S,4R,5R)-3,4-dihydroxy-5-(2-formamidoacetamido)oxolan-2-yl]methoxy}phosphonic acid
One carbon pool by folate PW000773
One Carbon Pool by Folate I PW001735
purine nucleotides de novo biosynthesis PW000910
purine nucleotides de novo biosynthesis 1435709748 PW000960
Thiamin diphosphate biosynthesis PW002028
purine nucleotides de novo biosynthesis 2 PW002033
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314.1865

C8H15N2O9P
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ECMDB01305L-Glutamic-gamma-semialdehyde

496-92-4
(2S)-2-amino-5-oxopentanoic acid
proline metabolism PW000794
131.1299

C5H9NO3
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ECMDB01303Zinc

7440-66-6
zinc(2+) ion
Pyrimidine metabolism PW000942
Collection of Reactions without pathways PW001891
Porphyrin metabolism PW000936
Secondary Metabolites: Ubiquinol biosynthesis PW000981
Secondary metabolites: isoprenoid biosynthesis (nonmevalonate pathway) PW000975
Secondary metabolites: methylerythritol phosphate and polyisoprenoid biosynthesis PW000958
inner membrane transport PW000786
preQ0 metabolism PW001893
purine nucleotides de novo biosynthesis PW000910
purine nucleotides de novo biosynthesis 1435709748 PW000960
threonine biosynthesis PW000817
Secondary Metabolites: Ubiquinol biosynthesis 2 PW002036
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65.409

Zn
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Displaying metabolites 3426 - 3450 of 3755 in total