D-allose-binding periplasmic protein (P39265)

Identification
Name:D-allose-binding periplasmic protein
Synonyms:
  • ALBP
Gene Name:alsB
Enzyme Class:Not Available
Biological Properties
General Function:Carbohydrate transport and metabolism
Specific Function:Part of the binding-protein-dependent transport system AlsBAC for D-allose
Cellular Location:Periplasm
SMPDB Pathways:
KEGG Pathways:
SMPDB Reactions:
1.0Thumb+1.0Thumb+1.0Thumb → 1.0Thumb+1.0Adenosine diphosphate+1.0Thumb+1.0Thumb+1.0Thumb
1.0D-allopyranose + 1.0Adenosine triphosphate + 1.0Water → 1.0D-allopyranose + 1.0Adenosine diphosphate + 1.0Hydrogen ion + 1.0Phosphate + 1.0ADP
ReactionCard
EcoCyc Reactions:
1.0Thumb+1.0Thumb+1.0Thumb → 1.0Thumb+1.0Thumb+1.0Thumb+1.0Thumb
1.0Adenosine triphosphate + 1.0Water + 1.0D-Allose → 1.0ADP + 1.0D-Allose + 1.0Hydrogen ion + 1.0Phosphate
ReactionCard
Complex Reactions:
1.0Thumb+1.0Thumb+1.0Thumb → 1.0Thumb+1.0Thumb+1.0Thumb+1.0Thumb
1.0Adenosine triphosphate + 1.0Water + 1.0Ribose → 1.0ADP + 1.0Hydrogen ion + 1.0Phosphate + 1.0Ribose
ReactionCard
Metabolites:
ECMDB IDNameView
ECMDB00538Adenosine triphosphateMetaboCard
ECMDB01341ADPMetaboCard
ECMDB24208D-allopyranoseMetaboCard
ECMDB01151D-AlloseMetaboCard
ECMDB21225Hydrogen ionMetaboCard
ECMDB01429PhosphateMetaboCard
ECMDB00283RiboseMetaboCard
ECMDB00494WaterMetaboCard
GO Classification:Not Available
Gene Properties
Blattner:b4088
Gene OrientationCounterclockwise
Centisome Percentage:92.88
Left Sequence End4309130
Right Sequence End4310065
Gene Sequence:
>936 bp
ATGGCCGCCGTTAACTTACGTCATATTGAAATTTTTCATGCGGTAATGACCGCCGGAAGC
CTGACTGAGGCGGCACACCTGCTACACACCTCACAGCCAACCGTCAGCCGCGAACTTGCG
CGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCT
ACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGC
ATTGTCAGCGCCGCAGAAAGTCTGCGCGAGTTTCGCCAGGGAGAACTGTCTATTGCCTGC
CTGCCGGTCTTTTCGCAATCTTTTTTACCGCAGCTCCTGCAACCCTTTCTGGCACGTTAT
CCCGATGTCAGCTTAAATATCGTGCCCCAGGAATCACCGCTACTTGAAGAGTGGCTCTCG
GCCCAGCGTCATGATTTAGGACTCACTGAAACGCTCCATACGCCTGCGGGAACAGAACGT
ACCGAATTACTCTCTTTAGATGAAGTGTGTGTGTTACCTCCGGGTCATCCGCTGGCGGTA
AAAAAGGTATTAACGCCGGATGATTTTCAGGGTGAGAACTACATCAGCCTTTCCCGTACT
GACAGCTATCGCCAGTTGCTGGATCAGCTATTTACTGAACATCAGGTTAAACGACGCATG
ATCGTAGAAACCCACAGCGCCGCGTCAGTCTGCGCAATGGTACGGGCGGGGGTAGGTATT
TCGGTGGTTAACCCGCTCACCGCACTAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGG
TTCAGTATTGCGGTTCCGTTCACCGTCAGCCTGATCCGCCCCCTGCACCGCCCGTCATCA
GCGCTGGTTCAGGCGTTTAGTGGGCATTTACAAGCGGGGTTACCGAAACTGGTCACTTCT
CTTGACGCTATTTTGTCGTCAGCTACGACAGCATAA
Protein Properties
Pfam Domain Function:
Protein Residues:311
Protein Molecular Weight:32910
Protein Theoretical pI:7
PDB File:1GUD
Signaling Regions:
  • 1-23
Transmembrane Regions:
  • None
Protein Sequence:
>D-allose-binding periplasmic protein
MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF
ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD
NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE
AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK
TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE
FKLVDSILVTQ
References
External Links:
ResourceLink
Uniprot ID:P39265
Uniprot Name:ALSB_ECOLI
GenBank Gene ID:AP009048
Genebank Protein ID:85675655
PDB ID:1GUD
Ecogene ID:EG12458
Ecocyc:EG12458
ColiBase:b4088
Kegg Gene:b4088
EchoBASE ID:EB2352
CCDB:ALSB_ECOLI
BacMap:16131914
General Reference:
  • Blattner, F. R., Plunkett, G. 3rd, Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., Shao, Y. (1997). "The complete genome sequence of Escherichia coli K-12." Science 277:1453-1462. Pubmed: 9278503
  • Burland, V., Plunkett, G. 3rd, Sofia, H. J., Daniels, D. L., Blattner, F. R. (1995). "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes." Nucleic Acids Res 23:2105-2119. Pubmed: 7610040
  • Chaudhuri, B. N., Ko, J., Park, C., Jones, T. A., Mowbray, S. L. (1999). "Structure of D-allose binding protein from Escherichia coli bound to D-allose at 1.8 A resolution." J Mol Biol 286:1519-1531. Pubmed: 10064713
  • Hayashi, K., Morooka, N., Yamamoto, Y., Fujita, K., Isono, K., Choi, S., Ohtsubo, E., Baba, T., Wanner, B. L., Mori, H., Horiuchi, T. (2006). "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Mol Syst Biol 2:2006.0007. Pubmed: 16738553
  • Kim, C., Song, S., Park, C. (1997). "The D-allose operon of Escherichia coli K-12." J Bacteriol 179:7631-7637. Pubmed: 9401019
  • Sorensen, K. I., Hove-Jensen, B. (1996). "Ribose catabolism of Escherichia coli: characterization of the rpiB gene encoding ribose phosphate isomerase B and of the rpiR gene, which is involved in regulation of rpiB expression." J Bacteriol 178:1003-1011. Pubmed: 8576032