ECMDB: Probable anaerobic dimethyl sulfoxide reductase chain ynfG (P0AAJ1)

Identification

Name:

Probable anaerobic dimethyl sulfoxide reductase chain ynfG

Synonyms:

DMSO reductase iron-sulfur subunit ynfG

Gene Name:

ynfG

Enzyme Class:

Not Available

Biological Properties

General Function:

Involved in electron carrier activity

Specific Function:

Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds

Cellular Location:

Not Available

SMPDB Pathways:

Not Available

KEGG Pathways:

Not Available

Complex Reactions:

1.0

→

1.0

1.0Menaquinone 8

1.0

1.0Hydrogen ion + 1.0Menaquinol 8 + 1.0Trimethylamine N-Oxide → 1.0Water + 1.0Menaquinone 8 + 1.0Trimethylamine
ReactionCard

1.0

→

1.0

1.0Menaquinone 8

1.0Dimethyl sulfoxide + 1.0Menaquinol 8 → 1.0Dimethyl sulfide + 1.0Water + 1.0Menaquinone 8
ReactionCard

1.0

→

1.0

1.0Menaquinone 8

1.0

1.0Menaquinol 8 + 1.0Selenocystathionine → 1.0Water + 1.0Menaquinone 8 + 1.0Selenite
ReactionCard

Metabolites:

ECMDB ID	Name	View
ECMDB21207	Dimethyl sulfide	MetaboCard
ECMDB21208	Dimethyl sulfoxide	MetaboCard
ECMDB21225	Hydrogen ion	MetaboCard
ECMDB21245	Menaquinol 8	MetaboCard
ECMDB21355	Selenite	MetaboCard
ECMDB06343	Selenocystathionine	MetaboCard
ECMDB00906	Trimethylamine	MetaboCard
ECMDB04161	Trimethylamine N-Oxide	MetaboCard
ECMDB00494	Water	MetaboCard

GO Classification:

Function
binding
electron carrier activity
iron-sulfur cluster binding
metal cluster binding

Gene Properties

Blattner:

b1589

Gene Orientation

Clockwise

Centisome Percentage:

35.80

Left Sequence End

1661014

Right Sequence End

1661631

Gene Sequence:

>618 bp
ATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCTGC
GAGCTGGCCTGTAAAGACTACAAAGATTTGACGCCAGAAGTCAGCTTCCGCCGCATTTAT
GAATATGCTGGCGGCGACTGGCAGGAAGATAACGGTGTCTGGCACCAGAACGTGTTTGCC
TACTATCTGTCGATTTCATGTAACCACTGCGAAGATCCGGCTTGTACTAAAGTCTGCCCG
AGCGGTGCGATGCATAAACGTGAAGATGGTTTTGTTGTGGTCGATGAAGATGTGTGCATT
GGCTGCCGCTACTGCCATATGGCTTGCCCGTATGGCGCACCGCAATATAACGAAACGAAA
GGCCATATGACCAAATGCGATGGTTGTTATGACCGTGTTGCGGAGGGTAAAAAGCCGATC
TGTGTTGAATCTTGTCCGCTGCGGGCGCTGGATTTCGGCCCTATCGACGAGCTGCGTAAA
AAACATGGCGATCTGGCGGCCGTTGCGCCGTTGCCGCGAGCTCACTTTACCAAACCGAAT
ATTGTGATCAAACCCAATGCCAATAGCCGCCCGACCGGGGATACCACTGGCTATCTGGCA
AACCCGAAGGAGGTGTGA

Protein Properties

Pfam Domain Function:

Fer4 (PF00037 )

Protein Residues:

205

Protein Molecular Weight:

22752

Protein Theoretical pI:

Signaling Regions:

None

Transmembrane Regions:

None

Protein Sequence:

>Probable anaerobic dimethyl sulfoxide reductase chain ynfG
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFA
YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK
GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN
IVIKPNANSRPTGDTTGYLANPEEV

References

External Links:

Resource	Link
Uniprot ID:	P0AAJ1
Uniprot Name:	YNFG_ECOLI
GenBank Gene ID:	AP009048
Genebank Protein ID:	1651422
Ecogene ID:	EG13845
Ecocyc:	EG13845
ColiBase:	b1589
Kegg Gene:	b1589
EchoBASE ID:	EB3606
CCDB:	YNFG_ECOLI
BacMap:	16129547

General Reference:

Aiba, H., Baba, T., Hayashi, K., Inada, T., Isono, K., Itoh, T., Kasai, H., Kashimoto, K., Kimura, S., Kitakawa, M., Kitagawa, M., Makino, K., Miki, T., Mizobuchi, K., Mori, H., Mori, T., Motomura, K., Nakade, S., Nakamura, Y., Nashimoto, H., Nishio, Y., Oshima, T., Saito, N., Sampei, G., Horiuchi, T., et, a. l. .. (1996). "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map." DNA Res 3:363-377. Pubmed: 9097039
Blattner, F. R., Plunkett, G. 3rd, Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., Shao, Y. (1997). "The complete genome sequence of Escherichia coli K-12." Science 277:1453-1462. Pubmed: 9278503
Hayashi, K., Morooka, N., Yamamoto, Y., Fujita, K., Isono, K., Choi, S., Ohtsubo, E., Baba, T., Wanner, B. L., Mori, H., Horiuchi, T. (2006). "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Mol Syst Biol 2:2006.0007. Pubmed: 16738553