ECMDB

Identification

Name:

Uncharacterized aminotransferase yfdZ

Synonyms:

Not Available

Gene Name:

yfdZ

Enzyme Class:

Not Available

Biological Properties

General Function:

Amino acid transport and metabolism

Specific Function:

Specific function unknown

Cellular Location:

Cytoplasm

SMPDB Pathways:

L-alanine metabolism PW000788

KEGG Pathways:

Not Available

KEGG Reactions:

1.0

↔

1.0

1.0alpha-Ketoglutarate + 1.0L-Alanine ↔ 1.0L-Glutamate + 1.0Pyruvic acid
ReactionCard

SMPDB Reactions:

1.0

1.0L-Glutamic acid

1.0

→

1.0

1.0L-Alanine

1.0

1.0Pyruvic acid + 1.0L-Glutamic acid + 1.0L-Glutamate → 1.0Oxoglutaric acid + 1.0L-Alanine + 1.0L-Alanine
ReactionCard

EcoCyc Reactions:

1.0

↔

1.0

1.0Oxoglutaric acid + 1.0L-Alanine ↔ 1.0L-Glutamate + 1.0Pyruvic acid
ReactionCard

Metabolites:

ECMDB ID	Name	View
ECMDB02812	alpha-Ketoglutarate	MetaboCard
ECMDB00161	L-Alanine	MetaboCard
ECMDB00148	L-Glutamate	MetaboCard
ECMDB04123	Oxoglutaric acid	MetaboCard
ECMDB00243	Pyruvic acid	MetaboCard

GO Classification:

Function
binding
catalytic activity
cofactor binding
pyridoxal phosphate binding
transferase activity
transferase activity, transferring nitrogenous groups
Process
biosynthetic process
metabolic process

Gene Properties

Blattner:

b2379

Gene Orientation

Counterclockwise

Centisome Percentage:

53.78

Left Sequence End

2495079

Right Sequence End

2496317

Gene Sequence:

>1239 bp
ATGAAAGCATTGACTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCG
GGCGTTGAACAGGCAGATGATATTATTCTGCGTATTACGGCAACGGCGATCTGTGGCTCT
GACCTCCATCTTTATCGAGGCAAAATACCTCAGGTTAAACATGGCGATATTTTTGGTCAT
GAATTTATGGGGGAAGTAGTTGAAACCGGAAAGGACGTAAAAAATTTGCAAAAAGGCGAC
CGAGTGGTAATTCCGTTCGTCATTGCTTGTGGCGACTGTTTTTTCTGTCGATTGCAACAA
TATGCCGCCTGCGAAAATACCAATGCGGGTAAAGGCGCTGCGCTCAATAAAAAACAGATA
CCAGCTCCAGCGGCATTGTTTGGTTATAGTCACCTGTATGGCGGCGTTCCTGGTGGGCAG
GCGGAATATGTCCGCGTCCCTAAAGGGAATGTGGGGCCGTTTAAAGTACCGCCTTTGCTT
TCAGATGATAAAGCGCTTTTCCTTTCTGATATTCTGCCAACGGCATGGCAGGCAGCAAAA
AATGCGCAGATCCAACAAGGTTCAAGCGTTGCAGTCTATGGTGCTGGTCCTGTGGGATTG
TTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGATTTTTGTTGTTGATCATCAT
CCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGAA
GACAGCGATCCGGCACAGTCAATTATTGAACAAACGGCAGGTCACCGGGGCGTGGATGCA
GTAATAGACGCCGTCGGTTTTGAAGCGAAAGGCAGCACCACGGAAACGGTGCTGACTAAC
CTGAAACTGGAGGGCAGCAGCGGTAAAGCGTTGCGTCAGTGTATTGCGGCGGTCAGGCGT
GGCGGCATTGTTAGCGTACCGGGCGTCTACGCTGGATTTATTCACGGTTTCCTGTTTGGC
GACGCCTTTGATAAAGGGTTGTCGTTTAAAATGGGACAGACCCACGTTCACGCATGGCTG
GGAGAATTATTACCGTTAATTGAGAAAGGATTACTGAAACCAGAAGAAATTGTTACCCAC
TATATGCCGTTTGAAGAGGCCGCCCGGGGATATGAGATTTTCGAAAAACGTGAAGAGGAG
TGCCGTAAGGTGATTCTGGTACCCGGTGCACAAAGCGCAGAGGCGGCGCAGAAGGCGGTT
TCAGGTCTGGTGAATGCGATGCCGGGGGGAACAATATGA

Protein Properties

Pfam Domain Function:

Aminotran_1_2 (PF00155 )

Protein Residues:

412

Protein Molecular Weight:

46216

Protein Theoretical pI:

Signaling Regions:

None

Transmembrane Regions:

None

Protein Sequence:

>Uncharacterized aminotransferase yfdZ
MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCT
VAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLD
HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP
SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFF
TLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA
EQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSP
GIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE

References

External Links:

Resource	Link
Uniprot ID:	P77434
Uniprot Name:	YFDZ_ECOLI
GenBank Gene ID:	AP009048
Genebank Protein ID:	4062224
Ecogene ID:	EG14198
Ecocyc:	EG14198
ColiBase:	b2379
Kegg Gene:	b2379
EchoBASE ID:	EB3950
CCDB:	YFDZ_ECOLI
BacMap:	16130311

General Reference:

Blattner, F. R., Plunkett, G. 3rd, Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., Gregor, J., Davis, N. W., Kirkpatrick, H. A., Goeden, M. A., Rose, D. J., Mau, B., Shao, Y. (1997). "The complete genome sequence of Escherichia coli K-12." Science 277:1453-1462. Pubmed: 9278503
Hayashi, K., Morooka, N., Yamamoto, Y., Fujita, K., Isono, K., Choi, S., Ohtsubo, E., Baba, T., Wanner, B. L., Mori, H., Horiuchi, T. (2006). "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Mol Syst Biol 2:2006.0007. Pubmed: 16738553
Vanderpool, C. K., Gottesman, S. (2007). "The novel transcription factor SgrR coordinates the response to glucose-phosphate stress." J Bacteriol 189:2238-2248. Pubmed: 17209026
Yamamoto, Y., Aiba, H., Baba, T., Hayashi, K., Inada, T., Isono, K., Itoh, T., Kimura, S., Kitagawa, M., Makino, K., Miki, T., Mitsuhashi, N., Mizobuchi, K., Mori, H., Nakade, S., Nakamura, Y., Nashimoto, H., Oshima, T., Oyama, S., Saito, N., Sampei, G., Satoh, Y., Sivasundaram, S., Tagami, H., Horiuchi, T., et, a. l. .. (1997). "Construction of a contiguous 874-kb sequence of the Escherichia coli -K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features." DNA Res 4:91-113. Pubmed: 9205837

Uncharacterized aminotransferase yfdZ (P77434)