ECMDB: Putative O-antigen transporter (P37781)

Identification

Name:

Putative O-antigen transporter

Synonyms:

Not Available

Gene Name:

rfbE

Enzyme Class:

Not Available

Biological Properties

General Function:

Involved in polysaccharide biosynthetic process

Specific Function:

Could be an O-antigen transporter

Cellular Location:

Cell inner membrane; Multi-pass membrane protein (Potential)

SMPDB Pathways:

Not Available

KEGG Pathways:

Not Available

Metabolites:

ECMDB ID	Name	View

GO Classification:

Component
cell part
membrane
Process
carbohydrate metabolic process
metabolic process
polysaccharide biosynthetic process
polysaccharide metabolic process
primary metabolic process

Gene Properties

Blattner:

Not Available

Gene Orientation

Not Available

Centisome Percentage:

Not Available

Left Sequence End

Not Available

Right Sequence End

Not Available

Gene Sequence:

>1257 bp
ATGGGTAGTAATATACATGGAATTAGTTGCACTGCAAATAATTATTTGAAACAGGCCTGG
AACGATATAAAAAATGAGTACGAAAAAAATCAAACATATTCAATCACGCTTTTTGAAAAC
ACACTGGTGTGTTTTATGCGGTTGTACAATGAACTCAGACGTAAAGTAAATGAAGAGGAT
ACTCCATGTCTGGAATGTGAATCACTAGAAAAAGAATTTGAGGAAATGCAGAATGATAAT
GATCTATCATTATTTATGAGAACATTGCGTACTAATGATACACAAATTTATTCAGGGGTT
TCAGGAGGTATTACATATACTATACAATATGTTCAAGATGTTGATATTGTTAGAGTGTCC
TTGCCGGGCAGAGGTTCAGAGTCTATCACAGATTTTAAAGGTTATTATTGGTATGGCTTT
ATGGAATATATTGAAAACATTAATGCGTGTGATGATGTTTTTTCTGAGTATTGTTTAGAT
AATGAAAATATGAGTATCCAGCCAGAACAGATAAATATGCCGGGAATATCTGATTTAGAT
ACTGGTATTGATTTGTCTGGCATATCTTTTATTCAGAGTGAAATTAATAAAACATATGGA
TTAAAATACGCTCCAGTAGATGGCGATGGATATTGTCTGTTAAGAGCCATACTGGTTTTA
AAAGAACATGAGTATTCATGGGCGCTGGGCAGCCATAAGACGCAAAAGCAAGTATACGAA
GAGTTTATTAAAATTGTTGATAAACAAACGATCGAGGCTCTTGTTGATACGGCATTCTAT
AATCTCAGGGAAGATGTAAAGACATTATTTGGCGTTGATCTGCAATCTGACAACAAAATT
CAGGGTGTGGGTAGTTTTATGTCATGGAGCTTTCTGTTTTTTAAAAAACAATTCATTGAT
AGTTGCTTGAATGACAAAAAATGCATACTGCATTTACCCGAGTTTATATTTAATGATAAC
AAGAATTTGCTTGCTTTAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTT
CTTGCTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCA
ATCTCCTTGGGAAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGATATTTAACA
AACACTGGCAATCATTATGATGTTTACCTCCCTCCTGAACTTTTTTCTCAGGCTTATAAG
TTAAAAAATAAGGAAATGAATGCGCAACTTGACTATTTAAATCGTTATGCAACTTAA

Protein Properties

Pfam Domain Function:

Polysacc_synt (PF01943 )

Protein Residues:

418

Protein Molecular Weight:

46398

Protein Theoretical pI:

Signaling Regions:

None

Transmembrane Regions:

8-28
37-57
85-105
124-144
165-185
217-237
251-271
297-317
334-354
362-382
385-405

Protein Sequence:

>Putative O-antigen transporter
MSIIKNSVWNLFGYAIPTLIAIPSLGFLARGLGPEGFGVYTIAIALVGYAGIFDVGLTRS
VIREIAIHRDNHHERTKVISTSTSFLVLFSCFGAFLLLIFSDGIVNYLKISGVEHSDIQL
AFKLLAICIPLFILNQLWSAILEGDEKFGIVNIQKSISSSCIAGIPAIFVFYSATLSAAV
AGLIFARVISILVSAYYVRNDIKISGVHFCYKTFKRLFFFGGWMTVSNIISPVMVYFDRF
IVSNIMGADKVAFYSAPAEVILKLGIIPAAIGRAVFPRLSNIKDFKEFKRNVNKSLLLMF
LICLPVIIIGLLYSGLVLKIWFGENYQINSFNILNVLLIGFFFNALAMIPFSAIQALGKS
KITALIHCAELVPYLALLYFMVEKYGLLGAAISWSIRVILDALLLQWLYTRMCSVYEN

References

External Links:

Resource	Link
Uniprot ID:	P37781
Uniprot Name:	RFBE_SHIFL
GenBank Gene ID:	AE005674
Genebank Protein ID:	24051290
CCDB:	RFBE_SHIFL

General Reference:

Jin, Q., Yuan, Z., Xu, J., Wang, Y., Shen, Y., Lu, W., Wang, J., Liu, H., Yang, J., Yang, F., Zhang, X., Zhang, J., Yang, G., Wu, H., Qu, D., Dong, J., Sun, L., Xue, Y., Zhao, A., Gao, Y., Zhu, J., Kan, B., Ding, K., Chen, S., Cheng, H., Yao, Z., He, B., Chen, R., Ma, D., Qiang, B., Wen, Y., Hou, Y., Yu, J. (2002). "Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157." Nucleic Acids Res 30:4432-4441. Pubmed: 12384590
Morona, R., Mavris, M., Fallarino, A., Manning, P. A. (1994). "Characterization of the rfc region of Shigella flexneri." J Bacteriol 176:733-747. Pubmed: 7507920
Wei, J., Goldberg, M. B., Burland, V., Venkatesan, M. M., Deng, W., Fournier, G., Mayhew, G. F., Plunkett, G. 3rd, Rose, D. J., Darling, A., Mau, B., Perna, N. T., Payne, S. M., Runyen-Janecky, L. J., Zhou, S., Schwartz, D. C., Blattner, F. R. (2003). "Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T." Infect Immun 71:2775-2786. Pubmed: 12704152