| Record Information |
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| Version | 2.0 |
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| Creation Date | 2015-09-08 20:06:40 -0600 |
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| Update Date | 2015-09-14 11:20:13 -0600 |
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| Secondary Accession Numbers | |
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| Identification |
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| Name: | CDP-DG(19:iso/19:0cycv8c) |
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| Description | CDP-DG(19:iso/19:0cycv8c) belongs to the family of CDP-diacylglycerols. It is a glycerophospholipid containing a diacylglycerol, with a cytidine diphosphate attached to the oxygen O1 or O2 of the glycerol part. As is the case with diacylglycerols, phosphatidylserines can have many different combinations of fatty acids of varying lengths and saturation attached to the C-1 and C-2 atoms. CDP-DG(19:iso/19:0cycv8c), in particular, consists of one 17-methylocatdecanoyl chain to C-1 atom, and one heptadec-11-12-cyclo-anoyl to the C-2 atom. In E. coli glycerophospholipid metabolism, The biosynthesis of CDP-diacylglycerol (CDP-DG) involves condensation of phosphatidic acid (PA) and cytidine triphosphate, with elimination of pyrophosphate, catalysed by the enzyme CDP-diacylglycerol synthase. The resulting CDP-diacylglycerol can be utilized immediately for the synthesis of phosphatidylglycerol (PG), and thence cardiolipin (CL), and of phosphatidylinositol (PI). CDP-DG(19:iso/19:0cycv8c) is also a substrate of CDP-diacylglycerol pyrophosphatase. It is involved in CDP-diacylglycerol degradation pathway. |
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| Structure | |
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| Synonyms: | Not Available |
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| Chemical Formula: | C50H91N3O15P2 |
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| Weight: | Average: 1036.232
Monoisotopic: 1035.592543238 |
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| InChI Key: | KZDVTXQPRNWSAQ-QQXYXHBCSA-N |
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| InChI: | InChI=1S/C50H91N3O15P2/c1-4-5-6-24-29-40-35-41-30-25-20-16-14-18-22-27-32-46(55)66-42(36-63-45(54)31-26-21-17-13-11-9-7-8-10-12-15-19-23-28-39(2)3)37-64-69(59,60)68-70(61,62)65-38-43(48(57)47(40)56)67-49(41)53-34-33-44(51)52-50(53)58/h33-34,39-43,47-49,56-57H,4-32,35-38H2,1-3H3,(H,59,60)(H,61,62)(H2,51,52,58)/t40?,41?,42-,43-,47+,48-,49-/m1/s1 |
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| CAS number: | Not Available |
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| IUPAC Name: | [(1R,9R,24S,25S,27R)-27-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-23-hexyl-4,6,24,25-tetrahydroxy-4,6,11-trioxo-3,5,7,10,26-pentaoxa-4λ⁵,6λ⁵-diphosphabicyclo[19.4.2]heptacosan-9-yl]methyl 17-methyloctadecanoate |
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| Traditional IUPAC Name: | [(1R,9R,24S,25S,27R)-27-(4-amino-2-oxopyrimidin-1-yl)-23-hexyl-4,6,24,25-tetrahydroxy-4,6,11-trioxo-3,5,7,10,26-pentaoxa-4λ⁵,6λ⁵-diphosphabicyclo[19.4.2]heptacosan-9-yl]methyl 17-methyloctadecanoate |
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| SMILES: | CCCCCCC1CC2CCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCCCCCCC(C)C)COP(O)(=O)OP(O)(=O)OC[C@@H](O[C@H]2N2C=CC(N)=NC2=O)[C@@H](O)[C@H]1O |
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| Chemical Taxonomy |
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| Description | belongs to the class of organic compounds known as organic pyrophosphates. These are organic compounds containing the pyrophosphate oxoanion, with the structure OP([O-])(=O)OP(O)([O-])=O. |
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| Kingdom | Organic compounds |
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| Super Class | Organic oxygen compounds |
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| Class | Organic oxoanionic compounds |
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| Sub Class | Organic pyrophosphates |
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| Direct Parent | Organic pyrophosphates |
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| Alternative Parents | |
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| Substituents | - Glycerophospholipid
- Organic pyrophosphate
- Hydroxypyrimidine
- Fatty acid ester
- Fatty acyl
- Pyrimidine
- Organic phosphoric acid derivative
- Hydropyrimidine
- Dicarboxylic acid or derivatives
- Heteroaromatic compound
- Secondary alcohol
- Lactone
- Carboxylic acid ester
- 1,2-diol
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Polyol
- Carboxylic acid derivative
- Organic nitrogen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Organooxygen compound
- Organonitrogen compound
- Carbonyl group
- Alcohol
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State: | Not Available |
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| Charge: | -2 |
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| Melting point: | Not Available |
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| Experimental Properties: | |
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| Predicted Properties | |
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| Biological Properties |
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| Cellular Locations: | Membrane |
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| Reactions: | |
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| SMPDB Pathways: | | phospholipid biosynthesis (CL(19:iso/19:0cycv8c/19:0/19:0)) | PW002008 |    |
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| KEGG Pathways: | Not Available |
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| EcoCyc Pathways: | Not Available |
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| Concentrations |
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| Not Available |
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| Spectra |
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| Spectra: | |
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| References |
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| References: | - Kanehisa, M., Goto, S., Sato, Y., Furumichi, M., Tanabe, M. (2012). "KEGG for integration and interpretation of large-scale molecular data sets." Nucleic Acids Res 40:D109-D114. Pubmed: 22080510
- Keseler, I. M., Collado-Vides, J., Santos-Zavaleta, A., Peralta-Gil, M., Gama-Castro, S., Muniz-Rascado, L., Bonavides-Martinez, C., Paley, S., Krummenacker, M., Altman, T., Kaipa, P., Spaulding, A., Pacheco, J., Latendresse, M., Fulcher, C., Sarker, M., Shearer, A. G., Mackie, A., Paulsen, I., Gunsalus, R. P., Karp, P. D. (2011). "EcoCyc: a comprehensive database of Escherichia coli biology." Nucleic Acids Res 39:D583-D590. Pubmed: 21097882
- Uniprot Consortium (2012). "Reorganizing the protein space at the Universal Protein Resource (UniProt)." Nucleic Acids Res 40:D71-D75. Pubmed: 22102590
- Yurtsever D. (2007). Fatty acid methyl ester profiling of Enterococcus and Esherichia coli for microbial source tracking. M.sc. Thesis. Villanova University: U.S.A
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| Synthesis Reference: | Not Available |
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| Material Safety Data Sheet (MSDS) | Not Available |
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| Links |
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| External Links: | | Resource | Link |
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| CHEBI ID | Not Available | | HMDB ID | Not Available | | Pubchem Compound ID | Not Available | | Kegg ID | Not Available | | ChemSpider ID | Not Available | | Wikipedia ID | Not Available | | BioCyc ID | Not Available |
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