N2-succinyl-L-arginine (ECMDB24190) (M2MDB006307)

IdentificationTaxonomyPhysical PropertiesBiological PropertiesSpectraConcentrationsLinksReferencesEnzymes (2)XML
Proteins (2)
Record Information
Version2.0
Creation Date2015-09-08 17:49:59 -0600
Update Date2015-09-14 16:46:11 -0600
Secondary Accession Numbers
  • ECMDB24190
Identification
Name: N2-succinyl-L-arginine
DescriptionN2-Succinyl-L-arginine belongs to the class of Amino Fatty Acids. These are fatty acids contaning an amine group. (inferred from compound structure)
Structure
Thumb
MOLSDFPDBSMILESInChI
Synonyms:
ValueSource
N(2)-(3-Carboxylatopropionyl)-L-arginineChEBI
N(2)-(3-Carboxylatopropionyl)-L-arginine anionChEBI
N(2)-Succinyl-L-arginineChEBI
Chemical Formula:C10H17N4O5
Weight:Average: 273.27
Monoisotopic: 273.120443243
InChI Key:UMOXFSXIFQOWTD-LURJTMIESA-M
InChI:InChI=1S/C10H18N4O5/c11-10(12)13-5-1-2-6(9(18)19)14-7(15)3-4-8(16)17/h6H,1-5H2,(H,14,15)(H,16,17)(H,18,19)(H4,11,12,13)/p-1/t6-/m0/s1
CAS number:Not Available
IUPAC Name:(2S)-5-{[amino(iminiumyl)methyl]amino}-2-(3-carboxylatopropanamido)pentanoate
Traditional IUPAC Name:N(2)-succinyl-L-arginine
SMILES:NC(=[NH2+])NCCC[C@H](NC(=O)CCC([O-])=O)C([O-])=O
Chemical Taxonomy
Description belongs to the class of organic compounds known as n-acyl-l-alpha-amino acids. These are n-acylated alpha amino acids which have the L-configuration of the alpha-carbon atom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentN-acyl-L-alpha-amino acids
Alternative Parents
Substituents
  • N-acyl-l-alpha-amino acid
  • Dicarboxylic acid or derivatives
  • Fatty amide
  • N-acyl-amine
  • Fatty acid
  • Fatty acyl
  • Guanidine
  • Carboxylic acid salt
  • Carboxamide group
  • Secondary carboxylic acid amide
  • Carboxylic acid
  • Carboximidamide
  • Organooxygen compound
  • Organonitrogen compound
  • Organic salt
  • Organic oxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic anion
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Physical Properties
State:Not Available
Charge:-1
Melting point:Not Available
Experimental Properties:
PropertyValueSource
Predicted Properties
PropertyValueSource
Water Solubility17.5 g/LALOGPS
logP-0.2ALOGPS
logP-3.8ChemAxon
logS-1.3ALOGPS
pKa (Strongest Acidic)3.28ChemAxon
pKa (Strongest Basic)12.15ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area173 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity96.73 m³·mol⁻¹ChemAxon
Polarizability26.4 ųChemAxon
Number of Rings0ChemAxon
Bioavailability1ChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Biological Properties
Cellular Locations:Cytoplasm
Reactions:
L-Arginine + Succinyl-CoA + Succinyl-CoA > Coenzyme A + Hydrogen ion + N2-succinyl-L-arginine + N2-succinyl-L-arginine
N2-succinyl-L-arginine + 2 Water + 2 Hydrogen ion + N2-succinyl-L-arginine > Carbon dioxide +2 Ammonium + N2-Succinyl-L-ornithine
SMPDB Pathways:
arginine metabolismPW000790 ThumbThumb?image type=greyscaleThumb?image type=simple
KEGG Pathways:Not Available
EcoCyc Pathways:Not Available
Concentrations
Not Available
Spectra
Spectra:
Spectrum TypeDescriptionSplash Key
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-00di-2090000000-17ac42ad4b74952a74c1View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-044i-4190000000-942edcdeb0bd591ae2a1View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-03di-9000000000-aa5dd01d82e492af084fView in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-00di-4090000000-ac40e7fcd03acf8002dcView in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-00di-9170000000-dff64d5881d443f1974fView in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-0006-9000000000-ae2e61423731b6c79167View in MoNA
References
References:Not Available
Synthesis Reference:Not Available
Material Safety Data Sheet (MSDS)Not Available
External Links:
ResourceLink
CHEBI ID58241
HMDB IDNot Available
Pubchem Compound ID25245674
Kegg IDNot Available
ChemSpider IDNot Available
Wikipedia IDNot Available
BioCyc IDNot Available

Enzymes

Protein Details
1. Arginine N-succinyltransferase
General function:
Involved in arginine N-succinyltransferase activity
Specific function:
Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine
Gene Name:
astA
Uniprot ID:
P0AE37
Molecular weight:
38456
Reactions
Succinyl-CoA + L-arginine = CoA + N(2)-succinyl-L-arginine.
Protein Details
2. N-succinylarginine dihydrolase
General function:
Involved in N-succinylarginine dihydrolase activity
Specific function:
Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2)
Gene Name:
astB
Uniprot ID:
P76216
Molecular weight:
49298
Reactions
N(2)-succinyl-L-arginine + 2 H(2)O = N(2)-succinyl-L-ornithine + 2 NH(3) + CO(2).