<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>2.0</version>
  <creation_date>2012-10-10 12:23:30 -0600</creation_date>
  <update_date>2015-06-03 17:26:15 -0600</update_date>
  <accession>ECMDB23240</accession>
  <m2m_id>M2MDB003630</m2m_id>
  <name>2,3-bis((3R)-3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate</name>
  <description>2,3-bis((3R)-3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate is an intermediate in Lipid IVA synthesis which is essesntial for the production of LPS.  Lipopolysaccharide (LPS), a major outer membrane component, is composed of three domains: Lipid A, the core, which is an oligosaccharide consisting of an inner and outer region; and a distal repeating unit known as the O-antigen. Lipid A is linked to a beta-1,6-linked glucosamine disaccharide. Attached to this is the inner core containing at least two 3-deoxy-D-manno-octulosonate (KDO) units followed by two units of heptose. The outer core region and the O-antigen are attached to one of the heptose units. For some time it was thought that the minimum structure for cell viability in E. coli had the di-Kdo moiety, but viable mutants lacking Kdo and with the basic tetra-acyl form of lipid A, i.e. lacking the two secondary acyl groups (and termed 'lipid IVA'), have recently been produced. Indeed, lipid IVA may be the minimum structure required for the viability of E. coli.</description>
  <synonyms>
    <synonym>(2R,3S,4R,5R,6R)-3-hydroxy-2-(hydroxymethyl)-5-(3R)-3-hydroxytetradecanoylamino-6-phosphonooxyoxan-4-yl (3R)-3-hydroxytetradecanoate</synonym>
    <synonym>(2R,3S,4R,5R,6R)-3-Hydroxy-2-(hydroxymethyl)-5-(3R)-3-hydroxytetradecanoylamino-6-phosphonooxyoxan-4-yl (3R)-3-hydroxytetradecanoic acid</synonym>
    <synonym>2,3-Bis((3R)-3-hydroxymyristoyl)-b-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis((3R)-3-hydroxymyristoyl)-b-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis((3R)-3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis((3R)-3-hydroxymyristoyl)-β-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis((3R)-3-hydroxymyristoyl)-β-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-a-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-a-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-alpha-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-b-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-b-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-β-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3-hydroxytetradecanoyl)-β-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3R)-3-hydroxymyristoyl-a-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3R)-3-hydroxymyristoyl-a-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3R)-3-hydroxymyristoyl-alpha-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3R)-3-hydroxymyristoyl-alpha-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(3R)-3-hydroxymyristoyl-α-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(3R)-3-hydroxymyristoyl-α-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(b-hydoroxymyristoyl)-b-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(b-hydoroxymyristoyl)-b-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(beta-hydoroxymyristoyl)-beta-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(beta-hydoroxymyristoyl)-beta-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Bis(β-hydoroxymyristoyl)-β-D-glucosaminyl 1-phosphate</synonym>
    <synonym>2,3-Bis(β-hydoroxymyristoyl)-β-D-glucosaminyl 1-phosphoric acid</synonym>
    <synonym>2,3-Diacylglucosamine 1-phosphate</synonym>
    <synonym>2,3-Diacylglucosamine 1-phosphoric acid</synonym>
    <synonym>2-Deoxy-3-O-(3R)-3-hydroxytetradecanoyl-2-{(3R)-3-hydroxytetradecanoylamino}-1-O-phosphono-a-D-glucopyranose</synonym>
    <synonym>2-Deoxy-3-O-(3R)-3-hydroxytetradecanoyl-2-{(3R)-3-hydroxytetradecanoylamino}-1-O-phosphono-alpha-D-glucopyranose</synonym>
    <synonym>2-Deoxy-3-O-(3R)-3-hydroxytetradecanoyl-2-{(3R)-3-hydroxytetradecanoylamino}-1-O-phosphono-α-D-glucopyranose</synonym>
    <synonym>Lipid X</synonym>
  </synonyms>
  <chemical_formula>C34H66NO12P</chemical_formula>
  <average_molecular_weight>711.8611</average_molecular_weight>
  <monisotopic_moleculate_weight>711.432263093</monisotopic_moleculate_weight>
  <iupac_name>{[(2R,3R,4R,5S,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(3R)-3-hydroxytetradecanamido]-4-{[(3R)-3-hydroxytetradecanoyl]oxy}oxan-2-yl]oxy}phosphonic acid</iupac_name>
  <traditional_iupac>lipid X</traditional_iupac>
  <cas_registry_number/>
  <smiles>CCCCCCCCCCC[C@@H](O)CC(=O)N[C@H]1[C@@H](OP(O)(O)=O)O[C@H](CO)[C@@H](O)[C@@H]1OC(=O)C[C@H](O)CCCCCCCCCCC</smiles>
  <inchi>InChI=1S/C34H66NO12P/c1-3-5-7-9-11-13-15-17-19-21-26(37)23-29(39)35-31-33(32(41)28(25-36)45-34(31)47-48(42,43)44)46-30(40)24-27(38)22-20-18-16-14-12-10-8-6-4-2/h26-28,31-34,36-38,41H,3-25H2,1-2H3,(H,35,39)(H2,42,43,44)/t26-,27-,28-,31-,32-,33-,34-/m1/s1</inchi>
  <inchikey>HEHQDWUWJVPREQ-XQJZMFRCSA-N</inchikey>
  <state/>
  <cellular_locations>
    <cellular_location>Membrane</cellular_location>
  </cellular_locations>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>4.38</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-5.05</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>6.33e-03 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>5.82</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>1.18</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>-1.3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>{[(2R,3R,4R,5S,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(3R)-3-hydroxytetradecanamido]-4-{[(3R)-3-hydroxytetradecanoyl]oxy}oxan-2-yl]oxy}phosphonic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>711.8611</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>711.432263093</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>CCCCCCCCCCC[C@@H](O)CC(=O)N[C@H]1[C@@H](OP(O)(O)=O)O[C@H](CO)[C@@H](O)[C@@H]1OC(=O)C[C@H](O)CCCCCCCCCCC</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C34H66NO12P</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C34H66NO12P/c1-3-5-7-9-11-13-15-17-19-21-26(37)23-29(39)35-31-33(32(41)28(25-36)45-34(31)47-48(42,43)44)46-30(40)24-27(38)22-20-18-16-14-12-10-8-6-4-2/h26-28,31-34,36-38,41H,3-25H2,1-2H3,(H,35,39)(H2,42,43,44)/t26-,27-,28-,31-,32-,33-,34-/m1/s1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>HEHQDWUWJVPREQ-XQJZMFRCSA-N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>212.31</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>180.56</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>80.1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>30</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>10</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>7</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>1084451</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::EiMs</type>
      <spectrum_id>4268</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308831</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308832</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308833</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308834</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308835</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308836</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308837</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308838</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308839</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308840</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308841</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308842</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308843</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308844</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308845</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308846</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308847</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308848</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308849</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>308850</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>26228</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>26229</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>26230</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>32786</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>32787</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>32788</spectrum_id>
    </spectrum>
  </spectra>
  <hmdb_id/>
  <pubchem_compound_id/>
  <chemspider_id/>
  <kegg_id>C04824</kegg_id>
  <chebi_id/>
  <biocyc_id/>
  <het_id>LP5</het_id>
  <wikipidia/>
  <foodb_id/>
  <general_references>
  </general_references>
  <synthesis_reference/>
  <msds_url/>
  <enzymes>
    <enzyme>
      <name>Lipid-A-disaccharide synthase</name>
      <uniprot_id>P10441</uniprot_id>
      <uniprot_name>LPXB_ECOLI</uniprot_name>
      <gene_name>lpxB</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P10441.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>UDP-2,3-diacylglucosamine hydrolase</name>
      <uniprot_id>P43341</uniprot_id>
      <uniprot_name>LPXH_ECOLI</uniprot_name>
      <gene_name>lpxH</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P43341.xml</protein_url>
    </enzyme>
  </enzymes>
  <transporters>
  </transporters>
  <reactions>
    <reaction_text>UDP-2,3-Bis(3-hydroxytetradecanoyl)glucosamine + 2,3-bis((3R)-3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate &gt; Uridine 5'-diphosphate + 2,3-bis(3-Hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>UDP-2,3-bis((3R)-3-hydroxymyristoyl)-alpha-D-glucosamine + Water &gt; 2,3-bis((3R)-3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate + Uridine 5'-monophosphate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
  </reactions>
  <concentrations>
  </concentrations>
</compound>
