<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>2.0</version>
  <creation_date>2012-07-30 14:54:55 -0600</creation_date>
  <update_date>2015-06-03 17:20:52 -0600</update_date>
  <accession>ECMDB21203</accession>
  <m2m_id>M2MDB001611</m2m_id>
  <name>D-Methionine</name>
  <description>D-methionine is a member of the chemical class known as Alpha Amino Acids and Derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon).Although L-methionine is a potent inhibitor of D-methionine uptake, D-methionine has little or no effect on the uptake of the L-isomer. (PMID 318639) A transporter of Escherichia coli specific for L- and D-methionine is the prototype for a new family within the ABC superfamily. (PMID 12819857) The metD D-methionine transporter locus of Escherichia coli is an ABC transporter gene cluster. (PMID 12169620)</description>
  <synonyms>
    <synonym>(2R)-2-amino-4-(methylsulfanyl)butanoate</synonym>
    <synonym>(2R)-2-amino-4-(methylsulfanyl)butanoic acid</synonym>
    <synonym>(2R)-2-amino-4-(methylsulphanyl)butanoate</synonym>
    <synonym>(2R)-2-amino-4-(methylsulphanyl)butanoic acid</synonym>
    <synonym>(R)-2-amino-4-(methylthio)butanoate</synonym>
    <synonym>(R)-2-amino-4-(methylthio)butanoic acid</synonym>
    <synonym>(R)-methionine</synonym>
    <synonym>D-(L)-Methionine</synonym>
    <synonym>D-2-Amino-4-(methylthio)butyrate</synonym>
    <synonym>D-2-Amino-4-(methylthio)butyric acid</synonym>
    <synonym>D-Met</synonym>
    <synonym>D-Methionin</synonym>
    <synonym>D-Methionine</synonym>
    <synonym>D-Metionien</synonym>
    <synonym>Methionine</synonym>
    <synonym>Methionine D-form</synonym>
    <synonym>R-Methionine</synonym>
  </synonyms>
  <chemical_formula>C5H11NO2S</chemical_formula>
  <average_molecular_weight>149.211</average_molecular_weight>
  <monisotopic_moleculate_weight>149.051049291</monisotopic_moleculate_weight>
  <iupac_name>(2R)-2-amino-4-(methylsulfanyl)butanoic acid</iupac_name>
  <traditional_iupac>D-methionine</traditional_iupac>
  <cas_registry_number>348-67-4</cas_registry_number>
  <smiles>CSCC[C@@H](N)C(O)=O</smiles>
  <inchi>InChI=1S/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/t4-/m1/s1</inchi>
  <inchikey>FFEARJCKVFRZRR-SCSAIBSYSA-N</inchikey>
  <state>Solid</state>
  <cellular_locations>
    <cellular_location>Cytosol</cellular_location>
    <cellular_location>Extra-organism</cellular_location>
    <cellular_location>Periplasm</cellular_location>
  </cellular_locations>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>-1.85</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-0.80</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>2.39e+01 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
    <property>
      <kind>melting_point</kind>
      <value>213 oC</value>
    </property>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>-2.2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>2.53</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>9.5</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>(2R)-2-amino-4-(methylsulfanyl)butanoic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>149.211</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>149.051049291</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>CSCC[C@@H](N)C(O)=O</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C5H11NO2S</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/t4-/m1/s1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>FFEARJCKVFRZRR-SCSAIBSYSA-N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>63.32</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>37.59</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>15.46</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>4</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>3472</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>4974</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>4975</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254808</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254809</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254810</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254811</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254812</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254813</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254814</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254815</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254816</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254817</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254818</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254819</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254820</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254821</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254822</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254823</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254824</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254825</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254826</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>254827</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>27662</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>27663</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>27664</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>34220</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>34221</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>34222</spectrum_id>
    </spectrum>
  </spectra>
  <hmdb_id/>
  <pubchem_compound_id>84815</pubchem_compound_id>
  <chemspider_id>76512</chemspider_id>
  <kegg_id>C00855</kegg_id>
  <chebi_id>16867</chebi_id>
  <biocyc_id>CPD-218</biocyc_id>
  <het_id>MED</het_id>
  <wikipidia/>
  <foodb_id/>
  <general_references>
    <reference>
      <reference_text>Winder, C. L., Dunn, W. B., Schuler, S., Broadhurst, D., Jarvis, R., Stephens, G. M., Goodacre, R. (2008). "Global metabolic profiling of Escherichia coli cultures: an evaluation of methods for quenching and extraction of intracellular metabolites." Anal Chem 80:2939-2948.</reference_text>
      <pubmed_id>18331064</pubmed_id>
    </reference>
    <reference>
      <reference_text>Kadner, R. J. (1977). "Transport and utilization of D-methionine and other methionine sources in Escherichia coli." J Bacteriol 129:207-216.</reference_text>
      <pubmed_id>318639</pubmed_id>
    </reference>
  </general_references>
  <synthesis_reference/>
  <msds_url/>
  <enzymes>
    <enzyme>
      <name>D-methionine transport system permease protein metI</name>
      <uniprot_id>P31547</uniprot_id>
      <uniprot_name>METI_ECOLI</uniprot_name>
      <gene_name>metI</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P31547.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Methionine import ATP-binding protein MetN</name>
      <uniprot_id>P30750</uniprot_id>
      <uniprot_name>METN_ECOLI</uniprot_name>
      <gene_name>metN</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P30750.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>D-methionine-binding lipoprotein metQ</name>
      <uniprot_id>P28635</uniprot_id>
      <uniprot_name>METQ_ECOLI</uniprot_name>
      <gene_name>metQ</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P28635.xml</protein_url>
    </enzyme>
  </enzymes>
  <transporters>
    <enzyme>
      <name>D-methionine transport system permease protein metI</name>
      <uniprot_id>P31547</uniprot_id>
      <uniprot_name>METI_ECOLI</uniprot_name>
      <gene_name>metI</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P31547.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Methionine import ATP-binding protein MetN</name>
      <uniprot_id>P30750</uniprot_id>
      <uniprot_name>METN_ECOLI</uniprot_name>
      <gene_name>metN</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P30750.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Outer membrane protein N</name>
      <uniprot_id>P77747</uniprot_id>
      <uniprot_name>OMPN_ECOLI</uniprot_name>
      <gene_name>ompN</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P77747.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Outer membrane pore protein E</name>
      <uniprot_id>P02932</uniprot_id>
      <uniprot_name>PHOE_ECOLI</uniprot_name>
      <gene_name>phoE</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P02932.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Outer membrane protein F</name>
      <uniprot_id>P02931</uniprot_id>
      <uniprot_name>OMPF_ECOLI</uniprot_name>
      <gene_name>ompF</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P02931.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>D-methionine-binding lipoprotein metQ</name>
      <uniprot_id>P28635</uniprot_id>
      <uniprot_name>METQ_ECOLI</uniprot_name>
      <gene_name>metQ</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P28635.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Outer membrane protein C</name>
      <uniprot_id>P06996</uniprot_id>
      <uniprot_name>OMPC_ECOLI</uniprot_name>
      <gene_name>ompC</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P06996.xml</protein_url>
    </enzyme>
  </transporters>
  <reactions>
    <reaction_text>Adenosine triphosphate + Water + D-Methionine &gt; ADP + Hydrogen ion + D-Methionine + Phosphate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>TRANS-RXN0-202</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Adenosine triphosphate + Water + D-Methionine &gt; ADP + Hydrogen ion + D-Methionine + Phosphate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>TRANS-RXN0-202</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Water + Adenosine triphosphate + D-Methionine &gt; Phosphate + ADP + D-Methionine + Hydrogen ion</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>TRANS-RXN0-202</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Water + Adenosine triphosphate + D-Methionine &gt; Phosphate + ADP + D-Methionine + Hydrogen ion</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>TRANS-RXN0-202</ecocyc_id>
    <pw_reaction_id/>
  </reactions>
  <concentrations>
  </concentrations>
</compound>
