<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>2.0</version>
  <creation_date>2012-07-30 14:54:44 -0600</creation_date>
  <update_date>2015-09-17 15:41:19 -0600</update_date>
  <accession>ECMDB21170</accession>
  <m2m_id>M2MDB001579</m2m_id>
  <name>3-Oxooctadecanoyl-CoA</name>
  <description>3-Oxooctadecanoyl-CoA is a metabolite intermediate in the microsomal fatty acid chain elongation system. Microsomal electron-transport components NADPH-cytochrome P450 reductase (EC 1.6.2.4) and cytochrome b5 (EC 1.6.2.2) participate in the conversion from 3-Oxooctadecanoyl-CoA to beta-hydroxystearoyl-CoA, the first reductive step of the microsomal chain elongating system initiated by NADPH. (PMID: 6404652)</description>
  <synonyms>
    <synonym>3'-Phosphoadenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(3-oxooctadecanoyl)sulfanyl]ethyl}amino)propyl]amino}butyl] dihydrogen diphosphate}</synonym>
    <synonym>3'-Phosphoadenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(3-oxooctadecanoyl)sulfanyl]ethyl}amino)propyl]amino}butyl] dihydrogen diphosphoric acid}</synonym>
    <synonym>3'-Phosphoadenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(3-oxooctadecanoyl)sulphanyl]ethyl}amino)propyl]amino}butyl] dihydrogen diphosphate}</synonym>
    <synonym>3'-Phosphoadenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-{[3-oxo-3-({2-[(3-oxooctadecanoyl)sulphanyl]ethyl}amino)propyl]amino}butyl] dihydrogen diphosphoric acid}</synonym>
    <synonym>3-Ketostearoyl-coa</synonym>
    <synonym>3-Ketostearoyl-coenzyme A</synonym>
    <synonym>3-Oxooctadecanoyl-CoA</synonym>
    <synonym>3-Oxooctadecanoyl-coenzyme A</synonym>
    <synonym>3-Oxostearoyl-CoA</synonym>
    <synonym>3-Oxostearoyl-Coenzyme A</synonym>
    <synonym>b-Ketostearoyl-CoA</synonym>
    <synonym>b-Ketostearoyl-coenzyme A</synonym>
    <synonym>Beta-Ketostearoyl-CoA</synonym>
    <synonym>Beta-Ketostearoyl-Coenzyme A</synonym>
    <synonym>β-Ketostearoyl-CoA</synonym>
    <synonym>β-Ketostearoyl-coenzyme A</synonym>
  </synonyms>
  <chemical_formula>C39H66N7O18P3S</chemical_formula>
  <average_molecular_weight>1045.964</average_molecular_weight>
  <monisotopic_moleculate_weight>1045.339788569</monisotopic_moleculate_weight>
  <iupac_name>{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-{[2-({2-[(3-oxooctadecanoyl)sulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid</iupac_name>
  <traditional_iupac>3-oxooctadecanoyl-coa</traditional_iupac>
  <cas_registry_number>86370-20-9</cas_registry_number>
  <smiles>CCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N</smiles>
  <inchi>InChI=1S/C39H68N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-27(47)22-30(49)68-21-20-41-29(48)18-19-42-37(52)34(51)39(2,3)24-61-67(58,59)64-66(56,57)60-23-28-33(63-65(53,54)55)32(50)38(62-28)46-26-45-31-35(40)43-25-44-36(31)46/h25-26,28,32-34,38,50-51H,4-24H2,1-3H3,(H,41,48)(H,42,52)(H,56,57)(H,58,59)(H2,40,43,44)(H2,53,54,55)/p-2/t28-,32-,33-,34+,38-/m1/s1</inchi>
  <inchikey>LGOGWHDPDVAUNY-LFZQUHGESA-L</inchikey>
  <state>Solid</state>
  <cellular_locations>
    <cellular_location>Cytosol</cellular_location>
    <cellular_location>Membrane</cellular_location>
  </cellular_locations>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>2.43</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-2.81</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>1.61e+00 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>0.82</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>0.82</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>4.01</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-{[2-({2-[(3-oxooctadecanoyl)sulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>1045.964</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>1045.339788569</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>CCCCCCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C39H66N7O18P3S</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C39H68N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-27(47)22-30(49)68-21-20-41-29(48)18-19-42-37(52)34(51)39(2,3)24-61-67(58,59)64-66(56,57)60-23-28-33(63-65(53,54)55)32(50)38(62-28)46-26-45-31-35(40)43-25-44-36(31)46/h25-26,28,32-34,38,50-51H,4-24H2,1-3H3,(H,41,48)(H,42,52)(H,56,57)(H,58,59)(H2,40,43,44)(H2,53,54,55)/p-2/t28-,32-,33-,34+,38-/m1/s1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>LGOGWHDPDVAUNY-LFZQUHGESA-L</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>380.7</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>246.54</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>105.18</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>36</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>18</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>9</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-4</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
    <pathway>
      <name>fatty acid oxidation (steareate)</name>
      <description>Although enzymes of the pathway handle both short and long chain fatty acids, it is the long chain compounds that induce the enzymes of the pathway . Each turn of the cycle removes two carbon atoms until only two or three remain. When even-numbered fatty acids are broken down, a two-carbon compound remains, acetyl-CoA. When odd number fatty acids are broken down, a three-carbon residue results, propionylCoA.  Unsaturated fatty acids, with cis double bonds located at odd-numbered carbon atoms, enter the main pathway of saturated fatty acid degradation by converting related metabolites of cis configuration and D stereoisomers, derived from breakdown of unsaturated fatty acids, to the trans- or L isomers of saturated fatty acid breakdown by an isomerase and an epimerase, respectively. When cis double bonds are located at even-numbered carbon atoms, such as linoleic acid (cis,cis(9,12)-octadecadienoic acid), after the fatty acid is degraded to the ten carbon stage an extra step is required to deal with the resulting compound, trans,δ(2)-cis,δ(4)decadienoyl-CoA. The enzyme 2,4-dienoyl-CoA reductase, converts this to trans,δ(2)decenoyl-CoA which enters the normal cycle at the point of the isomerase.

The order of the reaction is as follows:
a 2,3,4 saturated fatty acid is transformed into a 2,3,4 saturated fatty acyl CoA through a Long and short chain fatty acid CoA ligase. The 2,3,4 saturated fatty acyl CoA is then transformed into a trans 2 enoyl CoA. This enoyl can also be produced from a cis 3 enoyl CoA through a fatty acid oxidation protein complex. The trans 2 enoyl is transformed into a 3s 3 hydroxyacyl CoA through a 2,3 dehydroadipyl CoA hydratase. This same enzyme turns the product into a 3-oxoacyl-CoA. This is followed by the last step in the reaction when the oxoacyl-coa is turn into an acetyl coa+ a 2,3,4 saturated fatty acyl CoA through a 3-ketoacyl-CoA thiolase</description>
      <pathwhiz_id>PW001024</pathwhiz_id>
      <kegg_map_id/>
      <subject>Metabolic</subject>
    </pathway>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>36332</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>36333</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>36334</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>38780</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>38781</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>38782</spectrum_id>
    </spectrum>
  </spectra>
  <hmdb_id>HMDB06498</hmdb_id>
  <pubchem_compound_id>23724660</pubchem_compound_id>
  <chemspider_id>21865760</chemspider_id>
  <kegg_id>C16216</kegg_id>
  <chebi_id>50571</chebi_id>
  <biocyc_id>CPD-10260</biocyc_id>
  <het_id/>
  <wikipidia/>
  <foodb_id/>
  <general_references>
    <reference>
      <reference_text>Nagao, M., Ishibashi, T., Okayasu, T., Imai, Y. (1983). "Possible involvement of NADPH-cytochrome P450 reductase and cytochrome b5 on beta-ketostearoyl-CoA reduction in microsomal fatty acid chain elongation supported by NADPH." FEBS Lett 155:11-14.</reference_text>
      <pubmed_id>6404652</pubmed_id>
    </reference>
  </general_references>
  <synthesis_reference/>
  <msds_url/>
  <enzymes>
    <enzyme>
      <name>3-oxoacyl-[acyl-carrier-protein] reductase</name>
      <uniprot_id>P0AEK2</uniprot_id>
      <uniprot_name>FABG_ECOLI</uniprot_name>
      <gene_name>fabG</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P0AEK2.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>3-ketoacyl-CoA thiolase</name>
      <uniprot_id>P21151</uniprot_id>
      <uniprot_name>FADA_ECOLI</uniprot_name>
      <gene_name>fadA</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P21151.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Fatty acid oxidation complex subunit alpha</name>
      <uniprot_id>P21177</uniprot_id>
      <uniprot_name>FADB_ECOLI</uniprot_name>
      <gene_name>fadB</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P21177.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Probable enoyl-CoA hydratase paaF</name>
      <uniprot_id>P76082</uniprot_id>
      <uniprot_name>PAAF_ECOLI</uniprot_name>
      <gene_name>paaF</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P76082.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>3-ketoacyl-CoA thiolase_</name>
      <uniprot_id>P76503</uniprot_id>
      <uniprot_name>FADI_ECOLI</uniprot_name>
      <gene_name>fadI</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P76503.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Fatty acid oxidation complex subunit alpha_</name>
      <uniprot_id>P77399</uniprot_id>
      <uniprot_name>FADJ_ECOLI</uniprot_name>
      <gene_name>fadJ</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P77399.xml</protein_url>
    </enzyme>
  </enzymes>
  <transporters>
    <enzyme>
      <name>Fatty acid oxidation complex subunit alpha</name>
      <uniprot_id>P21177</uniprot_id>
      <uniprot_name>FADB_ECOLI</uniprot_name>
      <gene_name>fadB</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P21177.xml</protein_url>
    </enzyme>
  </transporters>
  <reactions>
    <reaction_text>3-Oxooctadecanoyl-CoA + Coenzyme A &lt;&gt; Acetyl-CoA + Palmityl-CoA</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>3-Oxooctadecanoyl-CoA + Hydrogen ion + NADH &lt;&gt; (S)-3-Hydroxyoctadecanoyl-CoA + NAD</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>3-Oxooctadecanoyl-CoA + NADPH + Hydrogen ion &lt;&gt; 3-Hydroxyoctadecanoyl-CoA + NADP</reaction_text>
    <kegg_reaction_id>R07759</kegg_reaction_id>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>(S)-3-Hydroxyoctadecanoyl-CoA + NAD &gt; NADH + Hydrogen ion + 3-Oxooctadecanoyl-CoA + 3-Oxooctadecanoyl-CoA</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id>PW_R003804</pw_reaction_id>
    <reaction_text>3-Oxooctadecanoyl-CoA + Coenzyme A + 3-Oxooctadecanoyl-CoA &gt; Acetyl-CoA + Stearoyl-CoA + Stearoyl-CoA</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id>PW_R003805</pw_reaction_id>
  </reactions>
  <concentrations>
  </concentrations>
</compound>
