<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>2.0</version>
  <creation_date>2012-05-31 14:04:44 -0600</creation_date>
  <update_date>2015-06-03 15:54:43 -0600</update_date>
  <accession>ECMDB04091</accession>
  <m2m_id>M2MDB000605</m2m_id>
  <name>2-Keto-3-methyl-valerate</name>
  <description>3-Methyl-2-oxovaleric acid is a metabolite of isoleucine in man, animals and bacteria. It is the alpha-keto acid analogue of isoleucine. 3-Methyl-2-oxovaleric acid is produced from isoleucine by cytosolic branched chain aminotransferase 1 (EC:2.6.1.42), whereupon it is further degraded by branched chain keto acid dehydrogenase E1 to 2-Methyl-1-hydroxybutyl-ThPP.</description>
  <synonyms>
    <synonym>&amp;alpha;-keto-&amp;beta;-methyl-valerate</synonym>
    <synonym>&amp;alpha;-keto-&amp;beta;-methyl-valeric acid</synonym>
    <synonym>&amp;alpha;-keto-methylvalerate</synonym>
    <synonym>&amp;alpha;-keto-methylvaleric acid</synonym>
    <synonym>(3&lt;i&gt;S&lt;/i&gt;)-3-Methyl-2-oxopentanoate</synonym>
    <synonym>(3R)-3-Methyl-2-oxopentanoate</synonym>
    <synonym>(3R)-3-Methyl-2-oxopentanoic acid</synonym>
    <synonym>(3S)-3-methyl-2-oxopentanoate</synonym>
    <synonym>(3S)-3-methyl-2-oxopentanoic acid</synonym>
    <synonym>(&lt;i&gt;S&lt;/i&gt;)-2-oxo-3-methylpentanoate</synonym>
    <synonym>(&lt;i&gt;S&lt;/i&gt;)-3-methyl-2-oxopentanoate</synonym>
    <synonym>(R)-3-methyl-2-oxopentanoate</synonym>
    <synonym>(R)-3-methyl-2-oxopentanoic acid</synonym>
    <synonym>(S)-2-oxo-3-methylpentanoate</synonym>
    <synonym>(S)-2-oxo-3-methylpentanoic acid</synonym>
    <synonym>(S)-3-methyl-2-oxopentanoate</synonym>
    <synonym>(S)-3-methyl-2-oxopentanoic acid</synonym>
    <synonym>(S)-3-methyl-2-oxovalerate</synonym>
    <synonym>(S)-3-methyl-2-oxovaleric acid</synonym>
    <synonym>2-keto-3-methyl-valerate</synonym>
    <synonym>2-Keto-3-methyl-valeric acid</synonym>
    <synonym>2-keto-3-methylvalerate</synonym>
    <synonym>2-keto-3-methylvaleric acid</synonym>
    <synonym>2-Oxo-3-methyl-N-valerate</synonym>
    <synonym>2-Oxo-3-methyl-N-valeric acid</synonym>
    <synonym>2-Oxo-3-methylpentanoate</synonym>
    <synonym>2-Oxo-3-methylpentanoic acid</synonym>
    <synonym>2-Oxo-3-methylvalerate</synonym>
    <synonym>2-Oxo-3-methylvaleric acid</synonym>
    <synonym>2-Oxoisoleucine</synonym>
    <synonym>2-Oxokolavenate</synonym>
    <synonym>2-Oxokolavenic acid</synonym>
    <synonym>3-Methyl-2-oxo-pentanoate</synonym>
    <synonym>3-Methyl-2-oxo-pentanoic acid</synonym>
    <synonym>3-Methyl-2-oxo-Valerate</synonym>
    <synonym>3-Methyl-2-oxo-Valeric acid</synonym>
    <synonym>3-Methyl-2-oxopentanoate</synonym>
    <synonym>3-Methyl-2-oxopentanoic acid</synonym>
    <synonym>3-Methyl-2-oxovalerate</synonym>
    <synonym>3-Methyl-2-oxovaleric</synonym>
    <synonym>3-Methyl-2-oxovaleric acid</synonym>
    <synonym>A-Keto-b-methyl-N-valerate</synonym>
    <synonym>A-Keto-b-methyl-N-valeric acid</synonym>
    <synonym>a-keto-b-Methyl-valerate</synonym>
    <synonym>a-keto-b-Methyl-valeric acid</synonym>
    <synonym>A-Keto-b-methylvalerate</synonym>
    <synonym>A-Keto-b-methylvaleric acid</synonym>
    <synonym>a-keto-Methylvalerate</synonym>
    <synonym>a-keto-Methylvaleric acid</synonym>
    <synonym>A-Oxo-b-methyl-N-valerate</synonym>
    <synonym>A-Oxo-b-methyl-N-valeric acid</synonym>
    <synonym>A-Oxo-b-methylvalerate</synonym>
    <synonym>A-Oxo-b-methylvaleric acid</synonym>
    <synonym>Alpha-Keto-beta-methyl-N-valerate</synonym>
    <synonym>Alpha-Keto-beta-methyl-N-valeric acid</synonym>
    <synonym>Alpha-Keto-beta-methyl-valerate</synonym>
    <synonym>Alpha-Keto-beta-methyl-valeric acid</synonym>
    <synonym>Alpha-Keto-beta-methylvalerate</synonym>
    <synonym>Alpha-Keto-beta-methylvaleric acid</synonym>
    <synonym>Alpha-Keto-methylvalerate</synonym>
    <synonym>Alpha-Keto-methylvaleric acid</synonym>
    <synonym>Alpha-Oxo-beta-methyl-N-valerate</synonym>
    <synonym>Alpha-Oxo-beta-methyl-N-valeric acid</synonym>
    <synonym>Alpha-Oxo-beta-methylvalerate</synonym>
    <synonym>Alpha-Oxo-beta-methylvaleric acid</synonym>
    <synonym>α-keto-Methylvalerate</synonym>
    <synonym>α-keto-Methylvaleric acid</synonym>
    <synonym>α-keto-β-Methyl-N-valerate</synonym>
    <synonym>α-keto-β-Methyl-N-valeric acid</synonym>
    <synonym>α-keto-β-Methyl-valerate</synonym>
    <synonym>α-keto-β-Methyl-valeric acid</synonym>
    <synonym>α-keto-β-Methylvalerate</synonym>
    <synonym>α-keto-β-Methylvaleric acid</synonym>
    <synonym>α-oxo-β-Methyl-N-valerate</synonym>
    <synonym>α-oxo-β-Methyl-N-valeric acid</synonym>
    <synonym>α-oxo-β-Methylvalerate</synonym>
    <synonym>α-oxo-β-Methylvaleric acid</synonym>
  </synonyms>
  <chemical_formula>C6H9O3</chemical_formula>
  <average_molecular_weight>129.1339</average_molecular_weight>
  <monisotopic_moleculate_weight>129.055169154</monisotopic_moleculate_weight>
  <iupac_name>(3S)-3-methyl-2-oxopentanoate</iupac_name>
  <traditional_iupac>(S)-3-methyl-2-oxopentanoate</traditional_iupac>
  <cas_registry_number>1460-34-0</cas_registry_number>
  <smiles>CC[C@H](C)C(=O)C([O-])=O</smiles>
  <inchi>InChI=1S/C6H10O3/c1-3-4(2)5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)/p-1/t4-/m0/s1</inchi>
  <inchikey>JVQYSWDUAOAHFM-BYPYZUCNSA-M</inchikey>
  <state>Solid</state>
  <cellular_locations>
    <cellular_location>Outer membrane</cellular_location>
    <cellular_location>Inner membrane</cellular_location>
  </cellular_locations>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>0.90</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-1.07</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>1.25e+01 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>1.75</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>3.52</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>-9.7</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>(3S)-3-methyl-2-oxopentanoate</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>129.1339</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>129.055169154</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>CC[C@H](C)C(=O)C([O-])=O</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C6H9O3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C6H10O3/c1-3-4(2)5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)/p-1/t4-/m0/s1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>JVQYSWDUAOAHFM-BYPYZUCNSA-M</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>57.2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>42.63</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>12.57</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>-1</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
    <pathway>
      <name>Valine, leucine and isoleucine biosynthesis</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec00290</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>Valine, leucine and isoleucine degradation</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec00280</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>isoleucine biosynthesis</name>
      <description>Isoleucine biosynthesis begins with L-threonine from the threonine biosynthesis pathway. L-threonine interacts with a threonine dehydratase biosynthetic releasing water, a hydrogen ion and (2Z)-2-aminobut-2-enoate. This compound is isomerized into a 2-iminobutanoate which interacts with water and a hydrogen ion spontaneously, resulting in the release of ammonium and 2-ketobutyric acid. This compound reacts with pyruvic acid and hydrogen ion through an acetohydroxybutanoate synthase / acetolactate synthase 2 resulting in carbon dioxide and (S)-2-Aceto-2-hydroxybutanoic acid. The latter compound is reduced by an NADPH driven acetohydroxy acid isomeroreductase releasing NADP and acetohydroxy acid isomeroreductase. The latter compound is dehydrated by a dihydroxy acid dehydratase resulting in  3-methyl-2-oxovaleric acid.This compound reacts in a reversible reaction with L-glutamic acid through a Branched-chain-amino-acid aminotransferase resulting in oxoglutaric acid and L-isoleucine.
L-isoleucine can also be transported into  the cytoplasm through two different methods:  a branched chain amino acid ABC transporter or a 
branched chain amino acid transporter BrnQ





y.

</description>
      <pathwhiz_id>PW000818</pathwhiz_id>
      <kegg_map_id/>
      <subject>Metabolic</subject>
    </pathway>
    <pathway>
      <name>isoleucine biosynthesis I (from threonine)</name>
      <ecocyc_pathway_id>ILEUSYN-PWY</ecocyc_pathway_id>
    </pathway>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257588</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257589</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257590</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257591</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257592</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257593</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257594</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257595</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257596</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257597</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257598</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257599</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257600</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257601</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257602</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257603</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257604</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257605</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257606</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>257607</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>23210</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>23211</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>23212</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>30008</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>30009</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>30010</spectrum_id>
    </spectrum>
  </spectra>
  <hmdb_id>HMDB00491</hmdb_id>
  <pubchem_compound_id>6857401</pubchem_compound_id>
  <chemspider_id>19951083</chemspider_id>
  <kegg_id>C00671</kegg_id>
  <chebi_id>35146</chebi_id>
  <biocyc_id>2-KETO-3-METHYL-VALERATE</biocyc_id>
  <het_id/>
  <wikipidia/>
  <foodb_id/>
  <general_references>
    <reference>
      <reference_text>Keseler, I. M., Collado-Vides, J., Santos-Zavaleta, A., Peralta-Gil, M., Gama-Castro, S., Muniz-Rascado, L., Bonavides-Martinez, C., Paley, S., Krummenacker, M., Altman, T., Kaipa, P., Spaulding, A., Pacheco, J., Latendresse, M., Fulcher, C., Sarker, M., Shearer, A. G., Mackie, A., Paulsen, I., Gunsalus, R. P., Karp, P. D. (2011). "EcoCyc: a comprehensive database of Escherichia coli biology." Nucleic Acids Res 39:D583-D590.</reference_text>
      <pubmed_id>21097882</pubmed_id>
    </reference>
    <reference>
      <reference_text>Kanehisa, M., Goto, S., Sato, Y., Furumichi, M., Tanabe, M. (2012). "KEGG for integration and interpretation of large-scale molecular data sets." Nucleic Acids Res 40:D109-D114.</reference_text>
      <pubmed_id>22080510</pubmed_id>
    </reference>
    <reference>
      <reference_text>van der Werf, M. J., Overkamp, K. M., Muilwijk, B., Coulier, L., Hankemeier, T. (2007). "Microbial metabolomics: toward a platform with full metabolome coverage." Anal Biochem 370:17-25.</reference_text>
      <pubmed_id>17765195</pubmed_id>
    </reference>
  </general_references>
  <synthesis_reference></synthesis_reference>
  <msds_url/>
  <enzymes>
    <enzyme>
      <name>Dihydroxy-acid dehydratase</name>
      <uniprot_id>P05791</uniprot_id>
      <uniprot_name>ILVD_ECOLI</uniprot_name>
      <gene_name>ilvD</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P05791.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Branched-chain-amino-acid aminotransferase</name>
      <uniprot_id>P0AB80</uniprot_id>
      <uniprot_name>ILVE_ECOLI</uniprot_name>
      <gene_name>ilvE</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P0AB80.xml</protein_url>
    </enzyme>
  </enzymes>
  <transporters>
  </transporters>
  <reactions>
  </reactions>
  <concentrations>
  </concentrations>
</compound>
