<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>2.0</version>
  <creation_date>2012-05-31 14:03:06 -0600</creation_date>
  <update_date>2015-09-17 15:41:46 -0600</update_date>
  <accession>ECMDB04042</accession>
  <m2m_id>M2MDB000575</m2m_id>
  <name>2-Dehydro-D-gluconate</name>
  <description>2-Keto-L-gluconate is a derivative of gluconic acid, which occurs naturally in fruit, honey and wine and is used as a food additive, an acidity regulator. It is also used in cleaning products where it helps cleaning up mineral deposits. It is a strong chelating agent, especially in alkaline solution. It chelates the anions of calcium, iron, aluminium, copper, and other heavy metals.  E. coli contains ketogluconate reductase genes, so it is likely that pathways exist for the metabolism of ketogluconate</description>
  <synonyms>
    <synonym>2-Dehydro-D-gluconate</synonym>
    <synonym>2-Dehydro-D-gluconic acid</synonym>
    <synonym>2-Dehydro-L-idonate</synonym>
    <synonym>2-Dehydro-L-idonic acid</synonym>
    <synonym>2-Keto-D-gluconate</synonym>
    <synonym>2-Keto-D-gluconic acid</synonym>
    <synonym>2-Keto-L-gulonate</synonym>
    <synonym>2-Keto-L-gulonic acid</synonym>
    <synonym>2-Ketoidonate</synonym>
    <synonym>2-Ketoidonic acid</synonym>
    <synonym>2-Oxogluconate</synonym>
    <synonym>2-Oxogluconic acid</synonym>
    <synonym>L-Ketoidonate</synonym>
    <synonym>L-Ketoidonic acid</synonym>
    <synonym>L-Sorbosonate</synonym>
    <synonym>L-Sorbosonic acid</synonym>
    <synonym>Provitamin C</synonym>
  </synonyms>
  <chemical_formula>C6H10O7</chemical_formula>
  <average_molecular_weight>194.1394</average_molecular_weight>
  <monisotopic_moleculate_weight>194.042652674</monisotopic_moleculate_weight>
  <iupac_name>(3S,4R,5R)-3,4,5,6-tetrahydroxy-2-oxohexanoic acid</iupac_name>
  <traditional_iupac>2-ketogluconic acid</traditional_iupac>
  <cas_registry_number/>
  <smiles>OCC(O)C(O)C(O)C(=O)C(O)=O</smiles>
  <inchi>InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-4,7-10H,1H2,(H,12,13)</inchi>
  <inchikey>VBUYCZFBVCCYFD-UHFFFAOYSA-N</inchikey>
  <state>Solid</state>
  <cellular_locations>
    <cellular_location>Cytoplasm</cellular_location>
    <cellular_location>Periplasm</cellular_location>
  </cellular_locations>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>-2.41</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-0.28</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>1.01e+02 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
    <property>
      <kind>melting_point</kind>
      <value>157.82</value>
    </property>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>-2.5</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>2.67</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>-3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>(3S,4R,5R)-3,4,5,6-tetrahydroxy-2-oxohexanoic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>194.1394</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>194.042652674</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>OCC(O)C(O)C(O)C(=O)C(O)=O</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C6H10O7</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-4,7-10H,1H2,(H,12,13)</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>VBUYCZFBVCCYFD-UHFFFAOYSA-N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>135.29</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>37.65</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>16.29</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>5</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>7</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>5</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
    <pathway>
      <name>Pentose phosphate pathway</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec00030</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>ketogluconate metabolism</name>
      <description/>
      <pathwhiz_id>PW002003</pathwhiz_id>
      <kegg_map_id/>
      <subject>Metabolic</subject>
    </pathway>
    <pathway>
      <name>ketogluconate metabolism</name>
      <ecocyc_pathway_id>KETOGLUCONMET-PWY</ecocyc_pathway_id>
    </pathway>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>1568</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>1600</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>26633</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>26634</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>26635</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>33191</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>33192</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>33193</spectrum_id>
    </spectrum>
  </spectra>
  <hmdb_id>HMDB11732</hmdb_id>
  <pubchem_compound_id>50</pubchem_compound_id>
  <chemspider_id>49</chemspider_id>
  <kegg_id>C06473</kegg_id>
  <chebi_id/>
  <biocyc_id>CPD-377</biocyc_id>
  <het_id/>
  <wikipidia/>
  <foodb_id/>
  <general_references>
    <reference>
      <reference_text>Keseler, I. M., Collado-Vides, J., Santos-Zavaleta, A., Peralta-Gil, M., Gama-Castro, S., Muniz-Rascado, L., Bonavides-Martinez, C., Paley, S., Krummenacker, M., Altman, T., Kaipa, P., Spaulding, A., Pacheco, J., Latendresse, M., Fulcher, C., Sarker, M., Shearer, A. G., Mackie, A., Paulsen, I., Gunsalus, R. P., Karp, P. D. (2011). "EcoCyc: a comprehensive database of Escherichia coli biology." Nucleic Acids Res 39:D583-D590.</reference_text>
      <pubmed_id>21097882</pubmed_id>
    </reference>
    <reference>
      <reference_text>Kanehisa, M., Goto, S., Sato, Y., Furumichi, M., Tanabe, M. (2012). "KEGG for integration and interpretation of large-scale molecular data sets." Nucleic Acids Res 40:D109-D114.</reference_text>
      <pubmed_id>22080510</pubmed_id>
    </reference>
    <reference>
      <reference_text>van der Werf, M. J., Overkamp, K. M., Muilwijk, B., Coulier, L., Hankemeier, T. (2007). "Microbial metabolomics: toward a platform with full metabolome coverage." Anal Biochem 370:17-25.</reference_text>
      <pubmed_id>17765195</pubmed_id>
    </reference>
  </general_references>
  <synthesis_reference></synthesis_reference>
  <msds_url/>
  <enzymes>
    <enzyme>
      <name>2,5-diketo-D-gluconic acid reductase B</name>
      <uniprot_id>P30863</uniprot_id>
      <uniprot_name>DKGB_ECOLI</uniprot_name>
      <gene_name>dkgB</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P30863.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Glyoxylate/hydroxypyruvate reductase B</name>
      <uniprot_id>P37666</uniprot_id>
      <uniprot_name>GHRB_ECOLI</uniprot_name>
      <gene_name>ghrB</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P37666.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>2,3-diketo-L-gulonate reductase</name>
      <uniprot_id>P37672</uniprot_id>
      <uniprot_name>DLGD_ECOLI</uniprot_name>
      <gene_name>dlgD</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P37672.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>2,5-diketo-D-gluconic acid reductase A</name>
      <uniprot_id>Q46857</uniprot_id>
      <uniprot_name>DKGA_ECOLI</uniprot_name>
      <gene_name>dkgA</gene_name>
      <protein_url>http://ecmdb.ca/proteins/Q46857.xml</protein_url>
    </enzyme>
  </enzymes>
  <transporters>
  </transporters>
  <reactions>
    <reaction_text>NADP + Gluconic acid &lt;&gt; Hydrogen ion + 2-Dehydro-D-gluconate + NADPH</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>1.1.1.215-RXN</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Hydrogen ion + NADPH + 2,5-Diketo-D-gluconate &lt;&gt; 2-Dehydro-D-gluconate + NADP</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>1.1.1.274-RXN</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Hydrogen ion + 2-Dehydro-D-gluconate + NADPH &lt;&gt; L-Idonate + NADP</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>YIAE2-RXN</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>2-Dehydro-D-gluconate + NADP &gt; 2,5-didehydro-D-gluconate + NADPH</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Gluconic acid + NADP &gt; 2-Dehydro-D-gluconate + NADPH</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>1.1.1.215-RXN</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Gluconic acid + NADP &lt;&gt; 2-Keto-D-gluconic acid + NADPH + Hydrogen ion + 2-Dehydro-D-gluconate</reaction_text>
    <kegg_reaction_id>R01739</kegg_reaction_id>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>2-Dehydro-D-gluconate + NADP &lt;&gt; 2,5-Diketo-D-gluconate + NADPH + Hydrogen ion</reaction_text>
    <kegg_reaction_id>R05823 </kegg_reaction_id>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>2-Keto-L-gluconate + NADPH + Hydrogen ion + 2-Dehydro-D-gluconate + NADPH &gt; Gluconic acid + NADP</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id>PW_R005689</pw_reaction_id>
    <reaction_text>2-Keto-L-gluconate + Hydrogen ion + NADPH + 2-Dehydro-D-gluconate + NADPH &gt; NADP + L-Idonate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id>PW_R005649</pw_reaction_id>
    <reaction_text>2,5-Diketo-D-gluconate + Hydrogen ion + NADPH + NADPH &gt; NADP + 2-Keto-L-gluconate + 2-Dehydro-D-gluconate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id>PW_R005648</pw_reaction_id>
    <reaction_text>2 2-Dehydro-D-gluconate + NADP &lt;&gt;2 2,5-Diketo-D-gluconate + NADPH + Hydrogen ion</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
  </reactions>
  <concentrations>
  </concentrations>
</compound>
