<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>2.0</version>
  <creation_date>2012-05-31 13:50:37 -0600</creation_date>
  <update_date>2015-09-13 12:56:11 -0600</update_date>
  <accession>ECMDB01352</accession>
  <m2m_id>M2MDB000351</m2m_id>
  <name>Hydroxypyruvic acid</name>
  <description>Hydroxypyruvic acid is an intermediate in the metabolism of Glycine, serine and threonine. It is a substrate for Serine--pyruvate aminotransferase and Glyoxylate reductase/hydroxypyruvate reductase.</description>
  <synonyms>
    <synonym>&amp;beta;-hydroxypyruvate</synonym>
    <synonym>&amp;beta;-hydroxypyruvic acid</synonym>
    <synonym>3-Hydroxy-2-oxopropanoate</synonym>
    <synonym>3-Hydroxy-2-oxopropanoic acid</synonym>
    <synonym>3-Hydroxypyruvate</synonym>
    <synonym>3-Hydroxypyruvic acid</synonym>
    <synonym>b-Hydroxypyruvate</synonym>
    <synonym>b-Hydroxypyruvic acid</synonym>
    <synonym>Beta-Hydroxypyruvate</synonym>
    <synonym>Beta-Hydroxypyruvic acid</synonym>
    <synonym>Hydroxypyruvate</synonym>
    <synonym>OH-pyr</synonym>
    <synonym>OH-pyruvate</synonym>
    <synonym>OH-pyruvic acid</synonym>
    <synonym>β-Hydroxypyruvate</synonym>
    <synonym>β-Hydroxypyruvic acid</synonym>
  </synonyms>
  <chemical_formula>C3H4O4</chemical_formula>
  <average_molecular_weight>104.0615</average_molecular_weight>
  <monisotopic_moleculate_weight>104.010958616</monisotopic_moleculate_weight>
  <iupac_name>3-hydroxy-2-oxopropanoic acid</iupac_name>
  <traditional_iupac>hydroxypyruvic acid</traditional_iupac>
  <cas_registry_number>1113-60-6</cas_registry_number>
  <smiles>OCC(=O)C(O)=O</smiles>
  <inchi>InChI=1S/C3H4O4/c4-1-2(5)3(6)7/h4H,1H2,(H,6,7)</inchi>
  <inchikey>HHDDCCUIIUWNGJ-UHFFFAOYSA-N</inchikey>
  <state>Solid</state>
  <cellular_locations>
    <cellular_location>Cytosol</cellular_location>
  </cellular_locations>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>-1.43</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>0.30</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>2.09e+02 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>-0.75</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>2.57</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>-3.4</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>3-hydroxy-2-oxopropanoic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>104.0615</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>104.010958616</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>OCC(=O)C(O)=O</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C3H4O4</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C3H4O4/c4-1-2(5)3(6)7/h4H,1H2,(H,6,7)</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>HHDDCCUIIUWNGJ-UHFFFAOYSA-N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>74.6</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>19.69</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>8.17</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>4</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
    <pathway>
      <name>Glycine, serine and threonine metabolism</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec00260</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>Methane metabolism</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec00680</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>Glyoxylate and dicarboxylate metabolism</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec00630</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>Microbial metabolism in diverse environments</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>ec01120</kegg_map_id>
      <subject/>
    </pathway>
    <pathway>
      <name>Metabolic pathways</name>
      <description/>
      <pathwhiz_id/>
      <kegg_map_id>eco01100</kegg_map_id>
      <subject/>
    </pathway>
  </pathways>
  <spectra>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>987</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>993</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>26035</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>30073</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>30074</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>30445</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>30446</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>31314</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>31315</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>32065</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>32336</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>38036</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>130903</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::CMs</type>
      <spectrum_id>138637</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147530</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147531</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147532</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147533</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147534</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147535</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147536</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147537</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147538</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147539</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147540</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147541</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147542</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147543</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147544</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147545</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147546</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147547</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147548</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::NmrOneD</type>
      <spectrum_id>147549</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>23711</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>23712</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>23713</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>30509</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>30510</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>30511</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2245682</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2724749</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2724750</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2724751</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2957085</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2957086</spectrum_id>
    </spectrum>
    <spectrum>
      <type>Specdb::MsMs</type>
      <spectrum_id>2957087</spectrum_id>
    </spectrum>
  </spectra>
  <hmdb_id>HMDB01352</hmdb_id>
  <pubchem_compound_id>964</pubchem_compound_id>
  <chemspider_id>939</chemspider_id>
  <kegg_id>C00168</kegg_id>
  <chebi_id>30841</chebi_id>
  <biocyc_id>OH-PYR</biocyc_id>
  <het_id>3PY</het_id>
  <wikipidia/>
  <foodb_id/>
  <general_references>
    <reference>
      <reference_text>Keseler, I. M., Collado-Vides, J., Santos-Zavaleta, A., Peralta-Gil, M., Gama-Castro, S., Muniz-Rascado, L., Bonavides-Martinez, C., Paley, S., Krummenacker, M., Altman, T., Kaipa, P., Spaulding, A., Pacheco, J., Latendresse, M., Fulcher, C., Sarker, M., Shearer, A. G., Mackie, A., Paulsen, I., Gunsalus, R. P., Karp, P. D. (2011). "EcoCyc: a comprehensive database of Escherichia coli biology." Nucleic Acids Res 39:D583-D590.</reference_text>
      <pubmed_id>21097882</pubmed_id>
    </reference>
    <reference>
      <reference_text>Kanehisa, M., Goto, S., Sato, Y., Furumichi, M., Tanabe, M. (2012). "KEGG for integration and interpretation of large-scale molecular data sets." Nucleic Acids Res 40:D109-D114.</reference_text>
      <pubmed_id>22080510</pubmed_id>
    </reference>
    <reference>
      <reference_text>van der Werf, M. J., Overkamp, K. M., Muilwijk, B., Coulier, L., Hankemeier, T. (2007). "Microbial metabolomics: toward a platform with full metabolome coverage." Anal Biochem 370:17-25.</reference_text>
      <pubmed_id>17765195</pubmed_id>
    </reference>
    <reference>
      <reference_text>Winder, C. L., Dunn, W. B., Schuler, S., Broadhurst, D., Jarvis, R., Stephens, G. M., Goodacre, R. (2008). "Global metabolic profiling of Escherichia coli cultures: an evaluation of methods for quenching and extraction of intracellular metabolites." Anal Chem 80:2939-2948.</reference_text>
      <pubmed_id>18331064</pubmed_id>
    </reference>
    <reference>
      <reference_text>Kolvraa S, Rasmussen K, Brandt NJ: D-glyceric acidemia: biohcemical studies of a new syndrome.  Pediatr Res. 1976 Oct;10(10):825-30.</reference_text>
      <pubmed_id>972784</pubmed_id>
    </reference>
  </general_references>
  <synthesis_reference>Behal, Francis J.  Hydroxypyruvic acid formation in Aspergillus niger.    Archives of Biochemistry and Biophysics  (1960),  88  110-12.</synthesis_reference>
  <msds_url>http://hmdb.ca/system/metabolites/msds/000/001/214/original/HMDB01352.pdf?1358461657</msds_url>
  <enzymes>
    <enzyme>
      <name>Hydroxypyruvate isomerase</name>
      <uniprot_id>P30147</uniprot_id>
      <uniprot_name>HYI_ECOLI</uniprot_name>
      <gene_name>hyi</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P30147.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Glyoxylate/hydroxypyruvate reductase B</name>
      <uniprot_id>P37666</uniprot_id>
      <uniprot_name>GHRB_ECOLI</uniprot_name>
      <gene_name>ghrB</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P37666.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Uncharacterized Nudix hydrolase nudL</name>
      <uniprot_id>P43337</uniprot_id>
      <uniprot_name>NUDL_ECOLI</uniprot_name>
      <gene_name>nudL</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P43337.xml</protein_url>
    </enzyme>
    <enzyme>
      <name>Glyoxylate/hydroxypyruvate reductase A</name>
      <uniprot_id>P75913</uniprot_id>
      <uniprot_name>GHRA_ECOLI</uniprot_name>
      <gene_name>ghrA</gene_name>
      <protein_url>http://ecmdb.ca/proteins/P75913.xml</protein_url>
    </enzyme>
  </enzymes>
  <transporters>
  </transporters>
  <reactions>
    <reaction_text>Hydrogen ion + Hydroxypyruvic acid + NADH &gt; Glyceric acid + NAD</reaction_text>
    <kegg_reaction_id>R01388</kegg_reaction_id>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Hydrogen ion + Hydroxypyruvic acid + NADPH &gt; Glyceric acid + NADP</reaction_text>
    <kegg_reaction_id>R01392</kegg_reaction_id>
    <ecocyc_id>RXN0-300</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Hydroxypyruvic acid &lt;&gt; Tartronate semialdehyde</reaction_text>
    <kegg_reaction_id>R01394</kegg_reaction_id>
    <ecocyc_id>RXN0-305</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Glyceric acid + NAD &lt;&gt; Hydroxypyruvic acid + NADH + Hydrogen ion</reaction_text>
    <kegg_reaction_id>R01388</kegg_reaction_id>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Glyceric acid + NADP &lt;&gt; Hydroxypyruvic acid + NADPH + Hydrogen ion</reaction_text>
    <kegg_reaction_id>R01392</kegg_reaction_id>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Phosphohydroxypyruvic acid + Water &gt; Hydroxypyruvic acid + Phosphate</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id>RXN0-6562</ecocyc_id>
    <pw_reaction_id/>
    <reaction_text>Glyceric acid + NAD(P)(+) &gt; Hydroxypyruvic acid + NAD(P)H</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Hydroxypyruvic acid &gt; Tartronate semialdehyde</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Hydroxypyruvic acid &lt;&gt; Tartronate semialdehyde</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Hydrogen ion + Hydroxypyruvic acid + NADH &gt; Glyceric acid + NAD</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
    <reaction_text>Hydroxypyruvic acid &lt;&gt; Tartronate semialdehyde</reaction_text>
    <kegg_reaction_id/>
    <ecocyc_id/>
    <pw_reaction_id/>
  </reactions>
  <concentrations>
  </concentrations>
</compound>
